Gene OSTLU_43898 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_43898 
Symbol 
ID5006728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009374 
Strand
Start bp165711 
End bp166232 
Gene Length522 bp 
Protein Length173 aa 
Translation table 
GC content68% 
IMG OID640422149 
Productpredicted protein 
Protein accessionXP_001422671 
Protein GI145356920 
COG category[R] General function prediction only 
COG ID[COG0724] RNA-binding proteins (RRM domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.00800465 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCGCC TGTTCCTCGA CCGCGAGCCG CTGACGCAGT ACAAAGACCG CCGGTTCAAC 
GGCACGCTCG ACGAGTACCT CGACCGCCTG CGCGCGTCGA CGACGCTGTA CGTCGGGAAC
GTGTCCTTTT ACACGACGGA GAATCAGATG CACGCGCTGT TTCGATCCGT CGGCGTCGTG
CGCGCCATCG TCGTCGGCCT CGACAGCGCG CGGCGCACGC CGTGCGGATT CGCGTTCGTC
GAGTACGAGA CGCGCGCGGA CGCCGAGCGG TGCGTGCGGT ACCTGAACGG GACGAAACTG
GACGATCGCG AGATCAGGAT CGACTTCGAC TGGGGCTACG AGCCGGGACG CGAGTTCGGA
CGAGGGAAAT CCGGTGGGCA GGTGCGAGAC GAGTACAGGA CGTACTACGA CGCGGGGCGG
GGCGGGTACG GGAAATTGTT GCGGGACGAG CTGGAGGGGA TGCGGGCGAG CGCGGAGGTG
GGGGAGAAGC GCGCGCGCGA CGACGGCGCC GAGGACGCGT AG
 
Protein sequence
MARLFLDREP LTQYKDRRFN GTLDEYLDRL RASTTLYVGN VSFYTTENQM HALFRSVGVV 
RAIVVGLDSA RRTPCGFAFV EYETRADAER CVRYLNGTKL DDREIRIDFD WGYEPGREFG
RGKSGGQVRD EYRTYYDAGR GGYGKLLRDE LEGMRASAEV GEKRARDDGA EDA