Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_43898 |
Symbol | |
ID | 5006728 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009374 |
Strand | - |
Start bp | 165711 |
End bp | 166232 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | |
GC content | 68% |
IMG OID | 640422149 |
Product | predicted protein |
Protein accession | XP_001422671 |
Protein GI | 145356920 |
COG category | [R] General function prediction only |
COG ID | [COG0724] RNA-binding proteins (RRM domain) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.00800465 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCGCC TGTTCCTCGA CCGCGAGCCG CTGACGCAGT ACAAAGACCG CCGGTTCAAC GGCACGCTCG ACGAGTACCT CGACCGCCTG CGCGCGTCGA CGACGCTGTA CGTCGGGAAC GTGTCCTTTT ACACGACGGA GAATCAGATG CACGCGCTGT TTCGATCCGT CGGCGTCGTG CGCGCCATCG TCGTCGGCCT CGACAGCGCG CGGCGCACGC CGTGCGGATT CGCGTTCGTC GAGTACGAGA CGCGCGCGGA CGCCGAGCGG TGCGTGCGGT ACCTGAACGG GACGAAACTG GACGATCGCG AGATCAGGAT CGACTTCGAC TGGGGCTACG AGCCGGGACG CGAGTTCGGA CGAGGGAAAT CCGGTGGGCA GGTGCGAGAC GAGTACAGGA CGTACTACGA CGCGGGGCGG GGCGGGTACG GGAAATTGTT GCGGGACGAG CTGGAGGGGA TGCGGGCGAG CGCGGAGGTG GGGGAGAAGC GCGCGCGCGA CGACGGCGCC GAGGACGCGT AG
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Protein sequence | MARLFLDREP LTQYKDRRFN GTLDEYLDRL RASTTLYVGN VSFYTTENQM HALFRSVGVV RAIVVGLDSA RRTPCGFAFV EYETRADAER CVRYLNGTKL DDREIRIDFD WGYEPGREFG RGKSGGQVRD EYRTYYDAGR GGYGKLLRDE LEGMRASAEV GEKRARDDGA EDA
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