6 homologs were found in PanDaTox collection
for query gene Bpro_5463 on replicon NC_007950
Organism: Polaromonas sp. JS666



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007950  Bpro_5463  hypothetical protein  100 
 
 
418 aa  820    Polaromonas sp. JS666  Bacteria  normal  0.931868  normal  0.0111345 
 
 
-
 
NC_007949  Bpro_5231  TrbL/VirB6 plasmid conjugal transfer protein  24.63 
 
 
472 aa  62  0.00000002  Polaromonas sp. JS666  Bacteria  hitchhiker  0.00626423  normal 
 
 
-
 
NC_012855  Rpic12D_4750  hypothetical protein  28.47 
 
 
440 aa  57.8  0.0000004  Ralstonia pickettii 12D  Bacteria  normal  normal  0.231745 
 
 
-
 
NC_010683  Rpic_5010  TrbL/VirB6 plasmid conjugal transfer protein  36 
 
 
338 aa  50.4  0.00006  Ralstonia pickettii 12J  Bacteria  normal  0.12085  normal 
 
 
-
 
NC_012851  Rpic12D_5415  TrbL/VirB6 plasmid conjugal transfer protein  36 
 
 
338 aa  50.4  0.00006  Ralstonia pickettii 12D  Bacteria  normal  n/a   
 
 
-
 
NC_007901  Rfer_4258  hypothetical protein  26.4 
 
 
633 aa  48.5  0.0002  Rhodoferax ferrireducens T118  Bacteria  n/a    n/a   
 
 
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