Gene Rfer_4258 details

Gene Information

• Locus tag: Rfer_4258
• ID: 3959833
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodoferax ferrireducens T118
• Kingdom: Bacteria
• Replicon accession: NC_007901
• Strand: -
• Start bp: 12974
• End bp: 14875
• Gene Length: 1902 bp
• Protein Length: 633 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 637909466
• Product: hypothetical protein
• Protein accession: YP_515943
• Protein GI: 89885745
• COG category: [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG3846] Type IV secretory pathway, TrbL components

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTGCTTCT TCCAAAAATG TCGTGCCTTG TTGGGGGCCT TGATTATTCT GTCAATTCCT 
GTGCCAGGCC TAACTGCAGC GGCCGCGGAC GGTACGGATT TGTCCACATG CACCCTAAGT 
CCAGGTGGGA CTCTCTATAC ATGCGGAGGC GGCGCGATTT ACAACCTTAA CGGCACGTTA 
AACACCGCGC CACTCGTGGG TCCTGGAGCG CCAGGAGAGG CACCCATGAG GCCGATTTCG 
GATTCTGAAC TTCATCAGGT AGACATGGCA TCGACCATCG TTAACATGAT GGATGGATTC 
TTCCGCCCAA TCGACAGAAT GGCCTCATTT TTTACGGGCT CTGGCACGAA TATTGTCTAT 
GCGCTTGTCC TTATAACCAT CGCGATGGGA GGCATCCAAC TGGCTGCGGG GACAACTGAT 
CTCTTTGATC TGGCCATTCA GGGAATCAAA CTTAGCTTTG TGGGGTCGCT TGTCTTGGCA 
TGTATGGTGG ACCAAGCATG GCTTGGGTAT CTGACTGGGA CTGGTCCGAC CACCATACCA 
AAAGAAATCG AGCGGGGGTT CATGTCAATC ATGTCGGGGT TCTCGCCGAC ATTCGCCGGC 
ACATCAGTAT CATCTTCGTC AGGCGAATTT CTCGGGGCGG TGATAAGCGA TCTGTTTACG 
TCCATCAAAA TTATGATGGG ACTTTCGTTC TGGGACCGCG GCCTTTCTAA TCCTTTGACA 
ATCGTTTCAT CGTTTATAAC CCTTATTCCG ACGATTTTGT TGTGGGTGTT TTCTGTGATC 
GCTTTCTGTA TTGCTGGTGC ACTTATCCTG GGAGAAGCCT TTGCAACAGT AATCGCAATC 
AAGCTCGCAT TTGCATTCAC CGGCTTACTG GTCCCGTGGT TGCTGTTTCG CCCGCTCCAG 
TTTCTTTTTG ACGCGTGGCT AAAAACGTTA CTCATCAGCT TCACGGCATT AGTCATTGCC 
GCATTGTTTG TGGCTGGGAT GGCGAGCTTT GGAACAGCTA TTCAAGCCGA ATTGGCTAGG 
ATTCCGACGA CCGGATTTTT TAGTGGGCCG CAAATTCAGG CCATTATGAG TCCCGTTTTT 
ATTGGATCGC TTATTCTGAT AACAATCGCA ACTAAAGTTA ACAGCATGGC TCAAACGCTG 
CTTAGCGGCG GTGCGCTTTC TGGAATTGGC ATTCATGCTT TCAGCCAGGC GATGAAGGCG 
ACGCAGGGAG TTACGTCGGC ACCTGGTGGC GCGGCGGCAA AGGCCTCTGG GATGACCAGC 
GCTGGCGCCA ACATGGCAAA ATCTGTCGCA TCCAAGGGTA TGAGCATGGG TAAGTCTGCC 
GCTTCCGGCA TCGGCGCGGT TGCGGGCGCG GCAAAGGCCG CGGCCAGCCC AGGACTGGGA 
TCTGCAAAAA CCGCCTTTGG GAACGCAATG AAGGGCCCAG GCGGTTCCGT AATGGCCGGG 
GCAAAGGCTG CATTACCCGG GATTCGCTCG GCCGGGGCGG GAGTGATGCG CGCGACAGCA 
TCTGGCGCCA AGTCGGCTGC GGTGGGCGGT CTCCAAGCAG CGGGGGGCGG CATCAAGTCT 
GCAGCGCAAT CGATTGCAAA TCCAGCATCC TTTGGCCAGT CTGCAACGGC CTCAATAGCC 
ACTAATAAAG GATTGGCGCC AACAAAACAG GAATCCCAAC AGGCAACCCG GGCTGGAAAT 
AGAGCCTTTA ACGAGGCTCT TGCAGAGGGT AAGGGATTCT CACATGCTCA GATTGTTGGT 
AAACGTGCAG TTTCGGGATC TCTAGTAACC GCCAGTAAAG CGCCTTCGAC CCCGAAATCT 
GCCGGTGCAG CTTCACCCGC AACACCGCCC ACACCGACTA CACCTGCTCA ATCTGCCGGT 
AGATTTCGCC CACTTCGCCC AACCAAGAAG GGAAACCCAT AG 

 

Protein sequence

MCFFQKCRAL LGALIILSIP VPGLTAAAAD GTDLSTCTLS PGGTLYTCGG GAIYNLNGTL 
NTAPLVGPGA PGEAPMRPIS DSELHQVDMA STIVNMMDGF FRPIDRMASF FTGSGTNIVY 
ALVLITIAMG GIQLAAGTTD LFDLAIQGIK LSFVGSLVLA CMVDQAWLGY LTGTGPTTIP 
KEIERGFMSI MSGFSPTFAG TSVSSSSGEF LGAVISDLFT SIKIMMGLSF WDRGLSNPLT 
IVSSFITLIP TILLWVFSVI AFCIAGALIL GEAFATVIAI KLAFAFTGLL VPWLLFRPLQ 
FLFDAWLKTL LISFTALVIA ALFVAGMASF GTAIQAELAR IPTTGFFSGP QIQAIMSPVF 
IGSLILITIA TKVNSMAQTL LSGGALSGIG IHAFSQAMKA TQGVTSAPGG AAAKASGMTS 
AGANMAKSVA SKGMSMGKSA ASGIGAVAGA AKAAASPGLG SAKTAFGNAM KGPGGSVMAG 
AKAALPGIRS AGAGVMRATA SGAKSAAVGG LQAAGGGIKS AAQSIANPAS FGQSATASIA 
TNKGLAPTKQ ESQQATRAGN RAFNEALAEG KGFSHAQIVG KRAVSGSLVT ASKAPSTPKS 
AGAASPATPP TPTTPAQSAG RFRPLRPTKK GNP