13 homologs were found in PanDaTox collection
for query gene Bpro_4771 on replicon NC_007948
Organism: Polaromonas sp. JS666



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007948  Bpro_4771  hypothetical protein  100 
 
 
130 aa  265  2e-70  Polaromonas sp. JS666  Bacteria  normal  0.140418  normal 
 
 
-
 
NC_007954  Sden_1206  hypothetical protein  45.13 
 
 
115 aa  113  8.999999999999998e-25  Shewanella denitrificans OS217  Bacteria  normal  0.712118  n/a   
 
 
-
 
NC_009512  Pput_3460  hypothetical protein  45.22 
 
 
122 aa  100  6e-21  Pseudomonas putida F1  Bacteria  normal  hitchhiker  0.000262407 
 
 
-
 
NC_002947  PP_2309  hypothetical protein  44.35 
 
 
122 aa  100  8e-21  Pseudomonas putida KT2440  Bacteria  normal  0.0978139  hitchhiker  0.000239917 
 
 
-
 
NC_008463  PA14_26990  hypothetical protein  42.73 
 
 
119 aa  95.5  2e-19  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.950564  normal 
 
 
-
 
NC_010501  PputW619_1751  hypothetical protein  41.07 
 
 
122 aa  95.9  2e-19  Pseudomonas putida W619  Bacteria  normal  hitchhiker  0.000000124112 
 
 
-
 
NC_007760  Adeh_3821  hypothetical protein  47.37 
 
 
123 aa  95.1  3e-19  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_1911  hypothetical protein  41.44 
 
 
122 aa  94.4  5e-19  Pseudomonas putida GB-1  Bacteria  normal  0.732075  hitchhiker  0.00000202003 
 
 
-
 
NC_009656  PSPA7_2286  hypothetical protein  44.04 
 
 
119 aa  94  6e-19  Pseudomonas aeruginosa PA7  Bacteria  decreased coverage  0.00837835  n/a   
 
 
-
 
NC_011145  AnaeK_3876  hypothetical protein  47.37 
 
 
123 aa  93.6  8e-19  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_4023  hypothetical protein  38.18 
 
 
121 aa  88.2  3e-17  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_2445  hypothetical protein  44.12 
 
 
120 aa  80.5  0.000000000000007  Pseudomonas mendocina ymp  Bacteria  hitchhiker  0.00231773  normal 
 
 
-
 
NC_012560  Avin_22950  hypothetical protein  34.19 
 
 
120 aa  62.8  0.000000002  Azotobacter vinelandii DJ  Bacteria  normal  0.631099  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>