10 homologs were found in PanDaTox collection
for query gene Bamb_5682 on replicon NC_008392
Organism: Burkholderia ambifaria AMMD



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008392  Bamb_5682  hypothetical protein  100 
 
 
116 aa  237  2.9999999999999997e-62  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.308192 
 
 
-
 
NC_010551  BamMC406_0835  hypothetical protein  42.86 
 
 
118 aa  84.7  4e-16  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B0667  hypothetical protein  42.72 
 
 
126 aa  82  0.000000000000002  Burkholderia xenovorans LB400  Bacteria  normal  0.297183  normal 
 
 
-
 
NC_007951  Bxe_A0152  hypothetical protein  43.96 
 
 
107 aa  71.6  0.000000000004  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A0666  hypothetical protein  35.09 
 
 
124 aa  64.7  0.0000000004  Burkholderia xenovorans LB400  Bacteria  normal  0.131147  normal  0.293028 
 
 
-
 
NC_008752  Aave_4587  hypothetical protein  38.26 
 
 
122 aa  55.5  0.0000002  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_2848  hypothetical protein  34.44 
 
 
141 aa  52.4  0.000002  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.308306  normal  0.122142 
 
 
-
 
NC_007005  Psyr_0109  hypothetical protein  32.61 
 
 
141 aa  50.1  0.00001  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_011094  SeSA_A1659  hypothetical protein  31.03 
 
 
110 aa  46.2  0.0002  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_011080  SNSL254_A1663  hypothetical protein  32.18 
 
 
170 aa  43.9  0.0008  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
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