10 homologs were found in PanDaTox collection
for query gene Amir_3772 on replicon NC_013093
Organism: Actinosynnema mirum DSM 43827



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013093  Amir_3772  hypothetical protein  100 
 
 
435 aa  884    Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00313382  n/a   
 
 
-
 
NC_013131  Caci_8542  hypothetical protein  41.26 
 
 
445 aa  293  4e-78  Catenulispora acidiphila DSM 44928  Bacteria  hitchhiker  0.0020593  hitchhiker  0.0000124506 
 
 
-
 
NC_012803  Mlut_00360  hypothetical protein  40.14 
 
 
416 aa  283  4.0000000000000003e-75  Micrococcus luteus NCTC 2665  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_1929  hypothetical protein  26.59 
 
 
429 aa  142  9.999999999999999e-33  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.036812 
 
 
-
 
NC_013216  Dtox_3918  hypothetical protein  27.04 
 
 
409 aa  125  1e-27  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.870645  normal  0.346395 
 
 
-
 
NC_002947  PP_3067  hypothetical protein  27.8 
 
 
425 aa  110  3e-23  Pseudomonas putida KT2440  Bacteria  normal  0.0803146  normal  0.450185 
 
 
-
 
NC_006578  pBT9727_0060  hypothetical protein  28.28 
 
 
502 aa  108  2e-22  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  n/a    n/a   
 
 
-
 
NC_008261  CPF_0947  hypothetical protein  27.21 
 
 
391 aa  101  2e-20  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_007955  Mbur_0565  hypothetical protein  25.23 
 
 
322 aa  51.2  0.00003  Methanococcoides burtonii DSM 6242  Archaea  hitchhiker  0.00786663  n/a   
 
 
-
 
NC_007614  Nmul_A0921  hypothetical protein  26.06 
 
 
321 aa  43.5  0.008  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
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