Gene CPF_0947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_0947 
Symbol 
ID4201138 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp1099982 
End bp1101157 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content23% 
IMG OID638081829 
Producthypothetical protein 
Protein accessionYP_695394 
Protein GI110798860 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAAAG CTTTTTGGGG GTATATTCCA TATGATGATA AGACTTTTGA AAAATTGTGG 
GAAACTGCAG ATTTTGTTTT AGATGCTAAT ATACTATTAA ATCTATATAG ATATTCGAAT
AATACAAAAG AAAAAGTGTT AAATAGTTTA GACAAAATAT CTGAGAGGAT ATGGATACCA
AATCAAACTG GTATAGAATA TTTTAATAAT AGAGTCTCAA TAATTTTAGA GCAAAGTAAG
ATTTATGATG AGGTTTTAGA AGAATTAAGT TTTTCTAAAA GTATAGATTA TATAAAAGCT
TTAAGACATT CAACTTTAGA AGATAAAAAG CCGGAAATTA TAGAACTTTT ACAAAAGTGT
GAAAATAAAA TAAAAGAAAT TATAAATGAG GATAAGAAGA AATCTGAAAA TATAATTGAA
GATGATTACA TTTTAAAAAA AATAGTTAAT ATATTTGATG GTAAAGTGGG TTCGTCTTTA
ACTGATAAAG ATTTAGAAAG CTATAAAAAA GATATTGATA TAAGATATTC TAAAAAGATA
CCACCTGGAT ACAAGGATAA TAAGAAAAAT GATGATAAAA AATATGGTGA TGCTATAAAT
TGGTTAGAAA TAATAAAATA CAGTAAAAAT AATAAAAAAA ATATTATTTA TATAACAGAT
GATAGAAAAG AAGATTGGAT TGAGATAATA GAGGGTAAAA AAATTGGTCC AAGAAAAGAA
TTATTAAATG AGTTTTATCG TTCAACTGAT GGAAATATTA TATACATATA TAATACCTAT
AGTTTTTTAG AAGCATTCAA TAAATATATT AATACGGAGA ATAACATAGG AAAAGATGTA
ATGGATGAAA TAAAAGACTT AGATACTATT TTAAATGATT TTGATAGTAA AAAAATTAGT
ATAATGAGCA AAAAAATATT TGATAAATTT GTAGGATTGG GTGTAGAACC TAATTGTTTG
ATAATGATTA ATCAAGAAAA ATTCAATAAA TATATGGAAA TCATTAAAGA TTGTCAAGAA
GGTGGAGCAG ATTTTCATTT ATTTATAGAT GATTTAAAAT TTTTGGAGTT CGTAGATAAT
TTATTAGTGT TGGAACCAAC GATTTCATTA TCTAAAAATA AATATTATTA TGAGTTGTAT
AAGAATTTTA TAATAAAAAA TAAAGTAACT GTATAA
 
Protein sequence
MRKAFWGYIP YDDKTFEKLW ETADFVLDAN ILLNLYRYSN NTKEKVLNSL DKISERIWIP 
NQTGIEYFNN RVSIILEQSK IYDEVLEELS FSKSIDYIKA LRHSTLEDKK PEIIELLQKC
ENKIKEIINE DKKKSENIIE DDYILKKIVN IFDGKVGSSL TDKDLESYKK DIDIRYSKKI
PPGYKDNKKN DDKKYGDAIN WLEIIKYSKN NKKNIIYITD DRKEDWIEII EGKKIGPRKE
LLNEFYRSTD GNIIYIYNTY SFLEAFNKYI NTENNIGKDV MDEIKDLDTI LNDFDSKKIS
IMSKKIFDKF VGLGVEPNCL IMINQEKFNK YMEIIKDCQE GGADFHLFID DLKFLEFVDN
LLVLEPTISL SKNKYYYELY KNFIIKNKVT V