Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_3772 |
Symbol | |
ID | 8327964 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 4437608 |
End bp | 4438915 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644944262 |
Product | hypothetical protein |
Protein accession | YP_003101500 |
Protein GI | 256377840 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00313382 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGATG GGGCGGGGAT CTACGACGAC TTTCCTGGTT ACCGGCTGCC GTCTGAGGAG GAGTTGGAGT CGGCCCTCAA GACGGCGCTA GTGGTCGTGG ACGCGAACGT GCTGCTCAAT CTCTACCGCT ACAACAGCTC CACCCGCGAT GACCTCTTAG GCGTACTGCG CGAGATCAAG GGCCGCCTAT GGGTTCCTCA CCAGGTGATG CACGAGTTCT GGCGGAACCG GATGATCGTG CTGAACAGCC GCGACACCAG CGTGGACCAG GTTTTCGCCG CACTGGACAA GCAGAACCGG GCAGCCGAGG ACGCCATCCG GTCGTGGGCG AAGGCGACGG CGATCCGAGA GGGCGAGTCC TCCCGGTTCA TCGAATCCTT GAGCGAGTTC TACTCCGACC TCAAGGGGCG GATCGGCGCA CTGACCCCGG TCTCCACCGC CAATGCGGAC CAGAGGCAGC ACGAGCCGGT TCTCCAGGAG GTCGAGGAGT TGCTCCGGGG CAAGGTCGGC TCTCCCCCGT CCGACGAGGA GTGGCGGCAA GCCGTGGCCG AGGGCAAGCG CCGTGCGGCG GCCGAGGAGC CTCCGGGGTA CTGCGACAAG GACAAGGGGG ACTCCTCACT GCCGGAAGGC CCCGCAGGGG ACTACCTGGT GTGGACCCAG CTGATGGGGG AGACGGCCAA GCGCGGCACA GACGTGCTGT TCGTGACCGG GGACGAGAAG GAGGACTGGT GGTGGCGCCA CAAGTCGGAC TTCTACGGCC CCAGGATCGA GCTCTCCTTG GAGCTGTTCC GGCACTGCGG GCAGCGGTTG CACATGATCC GTCCCACCGA ACTGCTCAAA CGGGCCAGAA CGCTGAACGT CGAGGTGCGC AGCGACTCCG TCGACGACGC GGAGCGGGTG AGTCGCGAGC GGGTCATCGC CCCCGAAATC GAGAACGACG AGGCCGGTGA GGCGGCCGAC GCGCTCTGGA CCGAGGAAGG GGTCACGGCG CTGCTGGACC TGCTGGAGGC GGAAGGGTTG ATGCTGGACA AGGTGATCAG GGCGGCGGCG CGGGAAGGCG GCACGATCAG CAGGGAGGCG GTCTACGCGA TCTGCGGGTA CGACAGCGAC CGGATGCTGC GCGGGTTCAC CAAGCCGACC AGGCGGATCA CCTCGGCACT ACAGCGGAAT GGGGTCGTGA GCCCAGGCGT GCGCCAGCCG TTGGACACCC TCTACTACTA CGGGGAAGTC AAGGCTGGCG CTTTCCGCAT CCCGGACGAG ATGGTTGCGA TCCTGGAAGG CGATCTCCCC CAAGACCGGG ACAGCTGA
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Protein sequence | MADGAGIYDD FPGYRLPSEE ELESALKTAL VVVDANVLLN LYRYNSSTRD DLLGVLREIK GRLWVPHQVM HEFWRNRMIV LNSRDTSVDQ VFAALDKQNR AAEDAIRSWA KATAIREGES SRFIESLSEF YSDLKGRIGA LTPVSTANAD QRQHEPVLQE VEELLRGKVG SPPSDEEWRQ AVAEGKRRAA AEEPPGYCDK DKGDSSLPEG PAGDYLVWTQ LMGETAKRGT DVLFVTGDEK EDWWWRHKSD FYGPRIELSL ELFRHCGQRL HMIRPTELLK RARTLNVEVR SDSVDDAERV SRERVIAPEI ENDEAGEAAD ALWTEEGVTA LLDLLEAEGL MLDKVIRAAA REGGTISREA VYAICGYDSD RMLRGFTKPT RRITSALQRN GVVSPGVRQP LDTLYYYGEV KAGAFRIPDE MVAILEGDLP QDRDS
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