7 homologs were found in PanDaTox collection
for query gene Amir_3588 on replicon NC_013093
Organism: Actinosynnema mirum DSM 43827



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013093  Amir_3588  hypothetical protein  100 
 
 
173 aa  332  2e-90  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_2093  hypothetical protein  47.54 
 
 
182 aa  133  9.999999999999999e-31  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.288095  normal  0.847034 
 
 
-
 
NC_013093  Amir_3995  hypothetical protein  41.44 
 
 
181 aa  114  6e-25  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_12130  hypothetical protein  44.65 
 
 
190 aa  82.8  0.000000000000002  Brachybacterium faecium DSM 4810  Bacteria  normal  0.141972  n/a   
 
 
-
 
NC_010816  BLD_0664  putative kinase  30.56 
 
 
480 aa  43.5  0.002  Bifidobacterium longum DJO10A  Bacteria  normal  0.432337  n/a   
 
 
-
 
NC_012850  Rleg_2611  hypothetical protein  28.25 
 
 
178 aa  41.6  0.006  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_3945  hypothetical protein  32.99 
 
 
176 aa  41.2  0.007  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
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