Gene Tpau_3945 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_3945 
Symbol 
ID9158126 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp4065622 
End bp4066152 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content65% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003648856 
Protein GI296141613 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGGAA CCGTCATCAT CCTCACCGGC CCGCCCGGCG CGGGGAAGAG CACCGTCGCC 
CGGGAGCTCG CCCGTAGCTA CGACCATGGC GTGCATCTGC ACACCGATGA CTTCTGGCAC
AGCATCGTCT CGGGTGCGAT CCCGCCGTAC GATCCGGCCT CTGCTGAGCA GAACCAGACA
GTGATGCGAG TGATCGCTGG TGCTGCCTTC ACCTATGCTG CAGGCGGATT CACGACGGTG
CTCGACGGGA TCGTGGGCCC GTGGATGCTT GAGCACTTCC GTGATCGCGG CCGGGCGACC
GATGTGCGCT ACGTTGTGCT CCGGCCCGAT CGAGCAACGA CGCTCGCCCG GGCGCAGGCT
CGCACAGCGG CCGACGCGCT CGTCGATACC CTGCCGATCG TCACCATGTG GGAACAGTTC
GCAGACCTCG GAGCCTACGA ATCACACGCC GTGGACACCG GCGCGGACAG CTTCGATCAG
ACGCTGACTC GTGTGCGGAA TGCGGTCACG AACAACCAGT TCCGACTCTA G
 
Protein sequence
MTGTVIILTG PPGAGKSTVA RELARSYDHG VHLHTDDFWH SIVSGAIPPY DPASAEQNQT 
VMRVIAGAAF TYAAGGFTTV LDGIVGPWML EHFRDRGRAT DVRYVVLRPD RATTLARAQA
RTAADALVDT LPIVTMWEQF ADLGAYESHA VDTGADSFDQ TLTRVRNAVT NNQFRL