6 homologs were found in PanDaTox collection
for query gene Amir_2501 on replicon NC_013093
Organism: Actinosynnema mirum DSM 43827



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013093  Amir_2501  CHRD domain containing protein  100 
 
 
154 aa  299  7.000000000000001e-81  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_2374  CHRD domain containing protein  34.46 
 
 
174 aa  68.2  0.00000000004  Actinosynnema mirum DSM 43827  Bacteria  hitchhiker  0.00000109429  n/a   
 
 
-
 
NC_007794  Saro_1194  hypothetical protein  32.63 
 
 
531 aa  57.8  0.00000006  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_3954  CHRD domain containing protein  30.59 
 
 
145 aa  46.6  0.0001  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.689351  normal  0.0638434 
 
 
-
 
NC_011729  PCC7424_3461  CHRD domain containing protein  25.14 
 
 
211 aa  42.7  0.002  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.664498 
 
 
-
 
NC_007406  Nwi_1080  CHRD  28.28 
 
 
141 aa  40  0.01  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal  0.183824 
 
 
-
 
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