Gene Bcav_3954 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3954 
Symbol 
ID7858017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp4373934 
End bp4374371 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content71% 
IMG OID643868057 
ProductCHRD domain containing protein 
Protein accessionYP_002883957 
Protein GI229822431 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.689351 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0638434 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCACGT CCACACGAAC CCGTCTCGGC GCCGTCGTCC TCGGTGCCGC CCTCTGCGCC 
GCTCTCGTCC CGGCCGCGGC CGCCTCCGGT AGCCCGGCGA TCCCGCTGAA CGTCGGCCAG
GAGACCACGG GCTCGAACAC GGGCGCCCAC GGCTTCTTCT CCTACGAGAT CTCGGGCGAC
CAGCTCTGCT ACACGATGTC GGCCCGGAAC CTCTCGGTCC CGGCCGTCGC GGCGCACATC
CACGTCGGCG AGCGGAAGGT CGCCGGGCCG ATCGTCGTCC CGCTCGACGT CGGAACCGGC
ACCACCTGGT CGATCTCCGA CTGCGTGACC GCCGACCCGG CGCTGCTCGC CGCGATCGAG
GCGTCCCCGC GCGACTACTA CATCAACGTC CACACACCGA CGTTCCCGGG CGGGGAGATC
CGCGGTCACC TGAAGTGA
 
Protein sequence
MRTSTRTRLG AVVLGAALCA ALVPAAAASG SPAIPLNVGQ ETTGSNTGAH GFFSYEISGD 
QLCYTMSARN LSVPAVAAHI HVGERKVAGP IVVPLDVGTG TTWSISDCVT ADPALLAAIE
ASPRDYYINV HTPTFPGGEI RGHLK