16 homologs were found in PanDaTox collection
for query gene Amir_1653 on replicon NC_013093
Organism: Actinosynnema mirum DSM 43827



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013093  Amir_1653  phage terminase, large subunit, PBSX family  100 
 
 
437 aa  888    Actinosynnema mirum DSM 43827  Bacteria  normal  0.328963  n/a   
 
 
-
 
NC_009487  SaurJH9_0342  PBSX family phage terminase large subunit  28.12 
 
 
402 aa  139  8.999999999999999e-32  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.543897  n/a   
 
 
-
 
NC_009632  SaurJH1_0351  PBSX family phage terminase large subunit  28.12 
 
 
402 aa  139  8.999999999999999e-32  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_2443  putative phage-related terminase large subunit  35.15 
 
 
240 aa  118  3e-25  Frankia sp. CcI3  Bacteria  normal  0.278617  normal 
 
 
-
 
NC_008530  LGAS_0605  Phage terminase large subunit  24.44 
 
 
414 aa  118  3e-25  Lactobacillus gasseri ATCC 33323  Bacteria  hitchhiker  0.0000114589  normal 
 
 
-
 
NC_008530  LGAS_0667  Phage terminase large subunit, ATPase  24.44 
 
 
414 aa  118  3e-25  Lactobacillus gasseri ATCC 33323  Bacteria  decreased coverage  0.000000088643  normal 
 
 
-
 
NC_008527  LACR_2109  Phage terminase large subunit  24.48 
 
 
411 aa  111  3e-23  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  0.110034  n/a   
 
 
-
 
NC_013171  Apre_0834  phage terminase, large subunit, PBSX family  23.98 
 
 
412 aa  91.7  3e-17  Anaerococcus prevotii DSM 20548  Bacteria  hitchhiker  0.00567279  n/a   
 
 
-
 
NC_007777  Francci3_2442  hypothetical protein  53.62 
 
 
160 aa  87.8  3e-16  Frankia sp. CcI3  Bacteria  normal  0.434675  normal 
 
 
-
 
NC_010644  Emin_0848  PBSX family phage terminase large subunit  22.74 
 
 
397 aa  59.7  0.00000009  Elusimicrobium minutum Pei191  Bacteria  normal  hitchhiker  0.00062306 
 
 
-
 
NC_011784  BbuZS7_A26  putative phage terminase, pbsx family protein  22.63 
 
 
450 aa  59.7  0.0000001  Borrelia burgdorferi ZS7  Bacteria  normal  0.0585539  n/a   
 
 
-
 
NC_011720  BbuZS7_AC67  phage terminase, large subunit, pbsx family protein  23.21 
 
 
450 aa  58.5  0.0000002  Borrelia burgdorferi ZS7  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_1197  hypothetical protein  25.63 
 
 
434 aa  58.5  0.0000002  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.906324 
 
 
-
 
NC_011720  BbuZS7_AC28  phage terminase, large subunit, pbsx family protein  24.26 
 
 
450 aa  54.3  0.000005  Borrelia burgdorferi ZS7  Bacteria  normal  n/a   
 
 
-
 
NC_009513  Lreu_0833  PBSX family phage terminase large subunit  20.79 
 
 
431 aa  50.8  0.00004  Lactobacillus reuteri DSM 20016  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_1259  phage terminase, large subunit, PBSX family  21.43 
 
 
416 aa  47  0.0007  Sebaldella termitidis ATCC 33386  Bacteria  normal  0.230021  n/a   
 
 
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