Gene Francci3_2442 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2442 
Symbol 
ID3905054 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2837464 
End bp2837946 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content63% 
IMG OID637879772 
Producthypothetical protein 
Protein accessionYP_481538 
Protein GI86741138 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.434675 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCCGTC CCCAGCTCCG CGAGCTCGAC TCGCAGACGG CCGTTCTCCA CCAACACATC 
CGCCAGCGCC TCACCACCAG CAACGCCGCA AACACCCGAC TCGACAACCG CCACGCACCA
CAGCAAACCA TCCCGACCAG CGAACCATCA CCCACGGAGA CCATCAGGCC ACACCCAGCC
CCCGCAGCCA CCGCCAACGT CGATCAACTC AACGGGACTT CCGACTACGT ACGCTCCACT
GTCGCCACCA TCCTCGGGCA GACGGTGCAC ATCGTAGGGG CCTCGGACTC AAGGAGCGAG
GGTCGCATCC GTGGACTCAC CGCGAAGACC GTCCTCTACG ACGAGATCAC GCTCTCGCCG
GAACCCATGT TCCAGCAGAC CCTCGCGCGT CTGAGCCTGC CCTACAGTCG TCTGATCGGT
TCGACTAATC CCGATAGTCC GGCGCATTGG CTCAGAAAAA AAATTCCTGC TACGTGCCGG
TGA
 
Protein sequence
MLRPQLRELD SQTAVLHQHI RQRLTTSNAA NTRLDNRHAP QQTIPTSEPS PTETIRPHPA 
PAATANVDQL NGTSDYVRST VATILGQTVH IVGASDSRSE GRIRGLTAKT VLYDEITLSP
EPMFQQTLAR LSLPYSRLIG STNPDSPAHW LRKKIPATCR