Gene Francci3_2443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2443 
Symbol 
ID3905055 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2837984 
End bp2838706 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content64% 
IMG OID637879773 
Productputative phage-related terminase large subunit 
Protein accessionYP_481539 
Protein GI86741139 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.278617 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAACC CCAGCCTTTC GCCGGCCTAC GTCGAGGCGC TGAAGAAGGA GTACGTCGGC 
CTCTGGTATG CCAGGTTCGT CGAGGGGCGC TGGATCATGG CTGAGGGTGT CGTGTACGAC
ATGTGGGACG AGGACCGCAT GGTCGAAGAC GAAATCCCCA GTATCGTGCG CTGGGTAGGC
ACGGGCGTGG ACCACGGCCA AGTTAATCCG TTCAACGCCA TCGTCGGCGG CATCGGGGTG
GACCGCCGCC TTCACCTGGT GGCCGAATAC CGGTACGAGT CGAAGCTCGC GCGCAGACAG
AAGACCGACG CCGAGTACTC GATGGCGTTG CAGGAGTTCC ACGCGCAGGT ACCGATCCCG
GGTACGAGCC TTCGGGGTGT GCGACCGGAG TACATCTGCG TCGACCCCTC GGCCGCGTCG
TTCGTGACCC AGCTCTACCG AGACGGTGTC AGCGGCGTGA TGAACGCAGA CAACGCGGTT
CTCGACGGTA TCCGCATGGT GGCGTCGCTG ATGGGCAACG ACCGGCTTCG CGTGCACCGG
TCCGTGAAGG GCTGGCGGGA AGAGGTCGGC TCGTATGCCT GGGACGATGA CGCTTCGGAG
CGCGGCGAGG AACGTCCGGT GAAGACCGAG GACCACGCGA TGGATAGCGC ACGGTATCTA
ATCAAGAGCA CAGAGCCACT GTGGTACAGC ACTCTCCGTC AGCCGCTCCA GCCTGCCGCG
TAG
 
Protein sequence
MDNPSLSPAY VEALKKEYVG LWYARFVEGR WIMAEGVVYD MWDEDRMVED EIPSIVRWVG 
TGVDHGQVNP FNAIVGGIGV DRRLHLVAEY RYESKLARRQ KTDAEYSMAL QEFHAQVPIP
GTSLRGVRPE YICVDPSAAS FVTQLYRDGV SGVMNADNAV LDGIRMVASL MGNDRLRVHR
SVKGWREEVG SYAWDDDASE RGEERPVKTE DHAMDSARYL IKSTEPLWYS TLRQPLQPAA