8 homologs were found in PanDaTox collection
for query gene AFE_1855 on replicon NC_011761
Organism: Acidithiobacillus ferrooxidans ATCC 23270



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011206  Lferr_1533  major facilitator superfamily MFS_1  100 
 
 
385 aa  694    Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal  0.0291496 
 
 
-
 
NC_011761  AFE_1855  hypothetical protein  100 
 
 
365 aa  694    Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_1839  major facilitator superfamily MFS_1  32.94 
 
 
415 aa  79  0.0000000000001  Nakamurella multipartita DSM 44233  Bacteria  normal  0.187835  normal  0.319077 
 
 
-
 
NC_013530  Xcel_1115  major facilitator superfamily MFS_1  27.52 
 
 
393 aa  53.1  0.000008  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.948444  n/a   
 
 
-
 
NC_013061  Phep_0309  major facilitator superfamily MFS_1  24.68 
 
 
394 aa  49.7  0.00008  Pedobacter heparinus DSM 2366  Bacteria  normal  0.265647  normal  0.0116051 
 
 
-
 
NC_013521  Sked_05760  fucose permease  26.55 
 
 
414 aa  47  0.0006  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.0598938  normal 
 
 
-
 
NC_008009  Acid345_0005  major facilitator transporter  28.43 
 
 
421 aa  44.7  0.002  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.0753564  normal  0.228788 
 
 
-
 
BN001308  ANIA_11209  hypothetical protein  23.43 
 
 
440 aa  43.5  0.006  Aspergillus nidulans FGSC A4  Eukaryota  normal  0.873381  normal 
 
 
-
 
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