Gene Sked_05760 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_05760 
Symbol 
ID8632213 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp649583 
End bp650827 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content71% 
IMG OID 
Productfucose permease 
Protein accessionYP_003313370 
Protein GI269793915 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0598938 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTACTCGC TCCTCCTGGC GATCATCTAC ATCGCCTTCA TCAGCCTCGG CCTCCCGGAC 
TCCCTCGTCG GGGCCGGGTG GCCGGTCATG CACCAGGACC TCGGCGTCCC GGTGGCCTAT
GCCGGCATCG TGACCATGAT CATCGCCAGC GGCACGATCG TGTCCAGCCT CGCCTCGGAG
CGGGTCACCC GCCGCCTCGG CACCGGCGTC GTCACGGCCG TCAGCGTGGG GCTCACCGCC
GCCGCCCTCG TCGGCTTCTC CGTCTCCGGC TCGTTCTGGG TGCTGTGCTT GTGGGCTGTC
CCCTACGGGC TGGGAGCCGG CGCGGTCGAC GCGGCCCTCA ACAACTACGT GGCCCTGCAC
TACGCGGCCC GGCACATGAA CTGGCTGCAC AGCTTCTGGG GGCTGGGGGC GTCGATCAGC
CCGTTCATCA TGAGCTACGC CCTGACCTCC GGCCAGGGGT GGTCGAGCGC CTACCGGATC
GTCGGTCTCA CCCAGGTCGT GCTCACGTTC GTGCTGATCG TGAGCCTGCC GGTGTGGGGG
AAGGCCGCCC GGTCGGCCCC GCCCGGGCAC GACGTCGCCG GCGGTGACGA GCAGGCGACC
GGACTCGAGC CGTCGGGCCG AGGCAGCACC CACGTGCCGC TCGCCGAGGC GCTGCGCATC
CCCGGGGTGG TGCTGGTCCT GGTCGCCTTC TTCGCCTACT GCGCGCTCGA GAGCACGGCG
ATCCTGTGGG CGGCGACGTA TCTGGTCACC GACCGGGGAG TCGACCCGGC CACGGCGGCA
GCCTTCGCCT CGCTGTTCTT GATCGGCATC ACCGGTGGAC GGTTCTTGGC CGGGTTCTTC
GCCGACCGGG TCGGCGACCG GCACCTGATC CGCGGGGGCT TCGTGACGGT CGGCCTCGGT
GTCGTGATGC TCGCGCTCCC TCTGGAGACC GACGCGCCGG CGCTCGTCGG TCTCGTGGCC
GTCGGGCTGG GGTGCGCACC GATCTACCCG GCGATCATCC ACTCCACCCC GGTGAACTTC
GGCCGACGCA GCTCGCAGGC GATCATCGGC ATCCAGATGG CCGCCGCGTA CACCGGTTCC
ACCCTGGCAC CGCCGGCGTT CGGCCTGGTC TCGACCGGGG TCGGGATGTG GACGTTCCCG
CTGTTCCTCG CCGTGCTGGC GGCTCTGGGC CTGCTCATGT CCGAGCGCCT CAACCGGCTC
GTCGGACGCC GAGCACAGGT CGACGAGGTC GCTCCGCCGT CCTGA
 
Protein sequence
MYSLLLAIIY IAFISLGLPD SLVGAGWPVM HQDLGVPVAY AGIVTMIIAS GTIVSSLASE 
RVTRRLGTGV VTAVSVGLTA AALVGFSVSG SFWVLCLWAV PYGLGAGAVD AALNNYVALH
YAARHMNWLH SFWGLGASIS PFIMSYALTS GQGWSSAYRI VGLTQVVLTF VLIVSLPVWG
KAARSAPPGH DVAGGDEQAT GLEPSGRGST HVPLAEALRI PGVVLVLVAF FAYCALESTA
ILWAATYLVT DRGVDPATAA AFASLFLIGI TGGRFLAGFF ADRVGDRHLI RGGFVTVGLG
VVMLALPLET DAPALVGLVA VGLGCAPIYP AIIHSTPVNF GRRSSQAIIG IQMAAAYTGS
TLAPPAFGLV STGVGMWTFP LFLAVLAALG LLMSERLNRL VGRRAQVDEV APPS