30 homologs were found in PanDaTox collection
for query gene Tpen_1320 on replicon NC_008698
Organism: Thermofilum pendens Hrk 5



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008698  Tpen_1320  CRISPR-associated RAMP Cmr4 family protein family protein  100 
 
 		 336 aa  648    Thermofilum pendens Hrk 5  Archaea  normal  0.215019  n/a   
 
 
-
 
CP001800  Ssol_2351  CRISPR-associated RAMP protein, Cmr4 family  33.44 
 
 		 269 aa  133  3.9999999999999996e-30  Sulfolobus solfataricus 98/2  Archaea  normal  1  n/a   
 
 
-
 
NC_010525  Tneu_0564  CRISPR-associated RAMP Cmr4 family protein family protein  33.54 
 
 		 296 aa  119  7e-26  Thermoproteus neutrophilus V24Sta  Archaea  normal  0.0596645  hitchhiker  0.00107083 
 
 
-
 
NC_009073  Pcal_0273  CRISPR-associated RAMP Cmr4 family protein family protein  35.22 
 
 		 300 aa  105  8e-22  Pyrobaculum calidifontis JCM 11548  Archaea  n/a    normal  1 
 
 
-
 
NC_009972  Haur_0697  CRISPR-associated RAMP Cmr4 family protein family protein  27.74 
 
 		 293 aa  101  2e-20  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_009954  Cmaq_1517  CRISPR-associated RAMP Cmr4 family protein family protein  29.61 
 
 		 317 aa  99.4  8e-20  Caldivirga maquilingensis IC-167  Archaea  normal  0.476222  normal  1 
 
 
-
 
NC_013411  GYMC61_1196  CRISPR-associated RAMP protein, Cmr4 family  28.12 
 
 		 297 aa  94  3e-18  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009972  Haur_0576  CRISPR-associated RAMP Cmr4 family protein family protein  24.21 
 
 		 278 aa  89.7  6e-17  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_009616  Tmel_1660  CRISPR-associated RAMP Cmr4 family protein family protein  27.1 
 
 		 276 aa  87.4  3e-16  Thermosipho melanesiensis BI429  Bacteria  normal  1  n/a   
 
 
-
 
NC_009376  Pars_1117  CRISPR-associated RAMP Cmr4 family protein family protein  29.85 
 
 		 308 aa  87.8  3e-16  Pyrobaculum arsenaticum DSM 13514  Archaea  normal  0.163915  normal  1 
 
 
-
 
NC_010483  TRQ2_1028  CRISPR-associated RAMP Cmr4 family protein family protein  29.43 
 
 		 292 aa  86.3  8e-16  Thermotoga sp. RQ2  Bacteria  normal  1  n/a   
 
 
-
 
NC_012793  GWCH70_0318  CRISPR-associated RAMP protein, Cmr4 family  29.17 
 
 		 292 aa  83.2  0.000000000000005  Geobacillus sp. WCH70  Bacteria  normal  1  n/a   
 
 
-
 
NC_008553  Mthe_0647  CRISPR-associated RAMP Cmr4 family protein family protein  28.12 
 
 		 267 aa  83.2  0.000000000000006  Methanosaeta thermophila PT  Archaea  normal  0.481851  n/a   
 
 
-
 
NC_011899  Hore_15130  CRISPR-associated RAMP protein, Cmr4 family  24.78 
 
 		 325 aa  82.8  0.000000000000007  Halothermothrix orenii H 168  Bacteria  normal  1  n/a   
 
 
-
 
NC_009073  Pcal_1285  CRISPR-associated RAMP Cmr4 family protein family protein  28.53 
 
 		 306 aa  82.8  0.000000000000008  Pyrobaculum calidifontis JCM 11548  Archaea  n/a    normal  0.0121106 
 
 
-
 
NC_013526  Tter_1949  CRISPR-associated RAMP protein, Cmr4 family  29.84 
 
 		 298 aa  81.6  0.00000000000002  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  1  n/a   
 
 
-
 
NC_010730  SYO3AOP1_0660  CRISPR-associated RAMP protein, Cmr4 family  21.9 
 
 		 258 aa  79  0.0000000000001  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013216  Dtox_2977  CRISPR-associated RAMP protein, Cmr4 family  29.45 
 
 		 273 aa  77.8  0.0000000000002  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  1  normal  0.457954 
 
 
-
 
NC_010424  Daud_1820  CRISPR-associated RAMP Cmr4 family protein family protein  26.59 
 
 		 288 aa  77.8  0.0000000000003  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.303143  n/a   
 
 
-
 
NC_013205  Aaci_2295  CRISPR-associated RAMP protein, Cmr4 family  27.99 
 
 		 297 aa  76.6  0.0000000000005  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
-
 
NC_007333  Tfu_1580  CRISPR-associated RAMP Cmr4 family protein family protein  42.86 
 
 		 300 aa  76.3  0.0000000000008  Thermobifida fusca YX  Bacteria  normal  1  n/a   
 
 
-
 
NC_008025  Dgeo_0962  CRISPR-associated RAMP Cmr4 family protein  30.43 
 
 		 264 aa  74.7  0.000000000002  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.60167  normal  0.960375 
 
 
-
 
NC_011901  Tgr7_1793  CRISPR-associated RAMP protein, Cmr4 family  27.83 
 
 		 294 aa  73.2  0.000000000005  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.486311  n/a   
 
 
-
 
NC_009654  Mmwyl1_2690  CRISPR-associated RAMP Cmr4 family protein family protein  24.38 
 
 		 283 aa  73.6  0.000000000005  Marinomonas sp. MWYL1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008148  Rxyl_0261  CRISPR-associated RAMP Cmr4 family protein family protein  26.38 
 
 		 266 aa  70.9  0.00000000003  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_013440  Hoch_1315  CRISPR-associated RAMP protein, Cmr4 family  26.07 
 
 		 327 aa  63.2  0.000000006  Haliangium ochraceum DSM 14365  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013946  Mrub_1482  Cmr4 family CRISPR-associated RAMP protein  24.35 
 
 		 245 aa  57.4  0.0000003  Meiothermus ruber DSM 1279  Bacteria  normal  0.541255  normal  0.493855 
 
 
-
 
NC_009634  Mevan_0108  CRISPR-associated RAMP Cmr4 family protein family protein  24.9 
 
 		 273 aa  55.5  0.000001  Methanococcus vannielii SB  Archaea  normal  0.0120254  n/a   
 
 
-
 
NC_008789  Hhal_0629  CRISPR-associated RAMP Cmr4 family protein family protein  25.45 
 
 		 304 aa  53.5  0.000005  Halorhodospira halophila SL1  Bacteria  normal  1  n/a   
 
 
-
 
NC_014213  Mesil_3378  hypothetical protein  24.34 
 
 		 262 aa  53.1  0.000007  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  1 
 
 
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