6 homologs were found in PanDaTox collection
for query gene Tcr_2044 on replicon NC_007520
Organism: Thiomicrospira crunogena XCL-2



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007520  Tcr_2044  hypothetical protein  100 
 
 
212 aa  419  1e-116  Thiomicrospira crunogena XCL-2  Bacteria  normal  0.150592  n/a   
 
 
-
 
NC_011004  Rpal_1851  high-affinity nickel-transporter  29.09 
 
 
231 aa  55.1  0.0000008  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0801332  n/a   
 
 
-
 
NC_007778  RPB_3876  high-affinity nickel-transporter  30.77 
 
 
232 aa  51.2  0.00001  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_008036  Sala_3212  high-affinity nickel-transporter  27.54 
 
 
239 aa  48.9  0.00006  Sphingopyxis alaskensis RB2256  Bacteria  n/a    n/a   
 
 
-
 
NC_013132  Cpin_4480  hypothetical protein  23.15 
 
 
231 aa  46.2  0.0003  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.17724  normal  0.265147 
 
 
-
 
NC_008820  P9303_19751  hypothetical protein  24.89 
 
 
278 aa  41.6  0.008  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal  0.0679603 
 
 
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