| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1851 |
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| Symbol | |
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| ID | 6409510 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1988683 |
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| End bp | 1989378 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642711739 |
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| Product | high-affinity nickel-transporter |
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| Protein accession | YP_001990852 |
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| Protein GI | 192290247 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2215] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0801332 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCGCGA TACTGGGGTT GGGGTTTCTG CTCGGGATGC AGCATGCGCT CGAGGTCGAT
CACATCGCCG CGGTGTCGAC GATCGCGGCG CGCCGCAGCG GCGTCGCCGA TATCGTCAAG
CACGGATTGA CCTGGGGCCT CGGACACACG CTGACGCTGT TCCTGTTCGC CGGCATCGCG
CTGGTGATCG GCCAATCGAT CCCGGAGCAG ATCGCCCAGC CGCTCGAAGG CGCGGTCGGC
TTCATGCTGG TGGCGCTCGG CGGCCATCTG CTGTGGCGGC TGTGGCGCGA CCGCGTCCAT
GTTCATGTCC ATCAGCACGG CGACGGCGTC CGCCATGTGC ATCTGCACAG CCACGCCGGA
CGGCTCAGCC ACGACGCGCC CACTGCTCAT CGGCACGAGC ACGGCTTCCG CTGGCGGACG
CTACTGGTCG GCCTGATGCA CGGCATGGCC GGTTCGGCGG CGCTGTTGGT GCTGGCGGTG
TCGCAGGCGC CGAGCCCGGT GCAAGGGCTA CTTTACGTTG CGCTGTTCGG GCTTGGTTCG
ATGGTCGGAA TGGGAGCGCT ATCGGCGGTG ATCGCGGTGC CGTTGGTGAT CTCGGCACGC
TCGCTGACGA CCGCTAACCG TCTGCTGCAG GGCGCGGTCG GTATCCTCAC GATCGCGATC
GGGCTGAGCA CCATCCACGC GACGCTGCTA GCTTAG
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| Protein sequence | MFAILGLGFL LGMQHALEVD HIAAVSTIAA RRSGVADIVK HGLTWGLGHT LTLFLFAGIA
LVIGQSIPEQ IAQPLEGAVG FMLVALGGHL LWRLWRDRVH VHVHQHGDGV RHVHLHSHAG
RLSHDAPTAH RHEHGFRWRT LLVGLMHGMA GSAALLVLAV SQAPSPVQGL LYVALFGLGS
MVGMGALSAV IAVPLVISAR SLTTANRLLQ GAVGILTIAI GLSTIHATLL A
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