| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_3876 |
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| Symbol | |
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| ID | 3911680 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 4431137 |
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| End bp | 4431835 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637885777 |
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| Product | high-affinity nickel-transporter |
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| Protein accession | YP_487480 |
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| Protein GI | 86750984 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2215] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGCAA TTCTGGGGTT GGGGTTTCTG CTGGGGATGC AGCATGCGCT CGAGGTCGAT
CATATCGCGG CGGTCTCGAC GATCGCGGCG CGGCGCAGCG GCGTGCGCGA CATCGTCAAG
CACGGGCTGA CCTGGGGGCT CGGCCACACG CTGACGCTGT TCCTGTTCGC CGGCGTCGCC
ATCGTGCTCG GCCAGGCGAT CCCGGACCAC ATCGCCACCC CGCTGGAAGG CGCGGTCGGA
TTCATGCTGG TCGGCCTCGG CGGCCATCTG CTGTGGCGGC TGTGGCAGGA CCGCGTCCAC
GCCCATGTGC ATCAGCACGG CGACGGCACG CGCCACATTC ATCTGCACAG CCACGCGGAC
CAGCGCGCCG CGCACGATGC GCCGAGCGCC CACATCCACG CGCACGGCTT CCGCTGGCGC
ACGCTGATCG TCGGGCTGAT GCACGGCATG GCCGGCTCCG CGGCGCTGCT GGTGCTCGCG
GTGTCGCAGG CGCAGAGCCC GACGCAGGGG CTGCTCTACG TGGCGCTGTT CGGCGTCGGC
TCGATGGTCG GCATGGGCGC GCTGTCGGCC GCGATCGCGG TGCCGCTGGT GATCTCGGCG
CGCGGTCTGA CTGCCGTCAA TCGCGGGCTG CAGATCGCGG TCGGCGTGCT GACCATCGCC
ATCGGGCTAC ACACGATCCA GTCGACGCTG TTGTCCTGA
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| Protein sequence | MFAILGLGFL LGMQHALEVD HIAAVSTIAA RRSGVRDIVK HGLTWGLGHT LTLFLFAGVA
IVLGQAIPDH IATPLEGAVG FMLVGLGGHL LWRLWQDRVH AHVHQHGDGT RHIHLHSHAD
QRAAHDAPSA HIHAHGFRWR TLIVGLMHGM AGSAALLVLA VSQAQSPTQG LLYVALFGVG
SMVGMGALSA AIAVPLVISA RGLTAVNRGL QIAVGVLTIA IGLHTIQSTL LS
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