18 homologs were found in PanDaTox collection
for query gene Swoo_4784 on replicon NC_010506
Organism: Shewanella woodyi ATCC 51908



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010506  Swoo_4784  hypothetical protein  100 
 
 
178 aa  364  1e-100  Shewanella woodyi ATCC 51908  Bacteria  decreased coverage  0.000000553025  unclonable  0.0000000104645 
 
 
-
 
NC_009831  Ssed_4393  hypothetical protein  67.42 
 
 
178 aa  248  5e-65  Shewanella sediminis HAW-EB3  Bacteria  decreased coverage  0.000000355578  hitchhiker  0.0000221943 
 
 
-
 
NC_009092  Shew_0096  hypothetical protein  62.92 
 
 
178 aa  232  2.0000000000000002e-60  Shewanella loihica PV-4  Bacteria  decreased coverage  0.0000129427  normal 
 
 
-
 
NC_009901  Spea_4111  hypothetical protein  45.51 
 
 
173 aa  159  2e-38  Shewanella pealeana ATCC 700345  Bacteria  normal  0.389263  n/a   
 
 
-
 
NC_011663  Sbal223_0297  hypothetical protein  43.26 
 
 
173 aa  157  9e-38  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_0285  hypothetical protein  43.26 
 
 
173 aa  157  9e-38  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_0293  hypothetical protein  43.26 
 
 
173 aa  157  9e-38  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_0292  hypothetical protein  43.26 
 
 
173 aa  156  2e-37  Shewanella baltica OS155  Bacteria  normal  0.922052  n/a   
 
 
-
 
NC_008577  Shewana3_0281  hypothetical protein  42.7 
 
 
173 aa  155  4e-37  Shewanella sp. ANA-3  Bacteria  normal  hitchhiker  0.000000237407 
 
 
-
 
NC_008321  Shewmr4_0280  hypothetical protein  41.57 
 
 
173 aa  150  5.9999999999999996e-36  Shewanella sp. MR-4  Bacteria  normal  hitchhiker  0.000000115662 
 
 
-
 
NC_008322  Shewmr7_3741  hypothetical protein  41.57 
 
 
173 aa  150  5.9999999999999996e-36  Shewanella sp. MR-7  Bacteria  normal  normal  0.0665218 
 
 
-
 
NC_009438  Sputcn32_0396  hypothetical protein  42.13 
 
 
173 aa  150  5.9999999999999996e-36  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_3533  hypothetical protein  43.26 
 
 
174 aa  150  1e-35  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_4429  hypothetical protein  40.45 
 
 
173 aa  148  4e-35  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007954  Sden_0108  hypothetical protein  40.45 
 
 
176 aa  134  9.999999999999999e-31  Shewanella denitrificans OS217  Bacteria  decreased coverage  0.000003316  n/a   
 
 
-
 
NC_008345  Sfri_0089  hypothetical protein  35.39 
 
 
173 aa  129  2.0000000000000002e-29  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009524  PsycPRwf_1922  peptidase  24.84 
 
 
167 aa  46.6  0.0002  Psychrobacter sp. PRwf-1  Bacteria  hitchhiker  0.00193807  normal 
 
 
-
 
NC_011901  Tgr7_0587  Propeptide PepSY amd peptidase M4  24.73 
 
 
103 aa  40.8  0.01  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>