Gene PsycPRwf_1922 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1922 
Symbol 
ID5206844 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp2389145 
End bp2389648 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content42% 
IMG OID640600154 
Productpeptidase 
Protein accessionYP_001280812 
Protein GI148653719 
COG category[S] Function unknown 
COG ID[COG3212] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00193807 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACCC TATCTGCTAT TGCAACATCA ATATTACTTA CCTTTGGTGC AGCCGCCCCA 
AGCTTTGCTG CTCCGACCAA AGCCGCTGTA GTACAAAGTC AGATCAATTT AAATCAAGCC
ATCACAATCG CCAAACAAAA GGCGCAGGGT AAAGTCAAAA GTATCGATTT TGATAGCGAT
GACTCAGAAT ATGAAGTGGA GCTGGCGTCT ACTAGCACCA AGTCCGAAGT CAAAATTAAT
GCGCAAACCG GTGCAGTAAA TAGCCAAAAA CAAGAGCGCA TTGAGAGCAA AGATACGGCC
AAATACCAAG CATTAAATAC TGCCAAGATT GACTTAGTCA AAGCGATTCA AATTGCCGCT
GGTCATGGTC AAGTGCTAGA AGCTGAGTTT GATATCGACA AGGGCAGCGC TGTATATGAA
GTAGAAACCC TTAGAAATGG TCAAAAATAT AAAGTGATTA TCGATGCCAA TACGGGCCGT
GTTATCCAAA CTAAGCGTGA TTAA
 
Protein sequence
MKTLSAIATS ILLTFGAAAP SFAAPTKAAV VQSQINLNQA ITIAKQKAQG KVKSIDFDSD 
DSEYEVELAS TSTKSEVKIN AQTGAVNSQK QERIESKDTA KYQALNTAKI DLVKAIQIAA
GHGQVLEAEF DIDKGSAVYE VETLRNGQKY KVIIDANTGR VIQTKRD