Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1922 |
Symbol | |
ID | 5206844 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 2389145 |
End bp | 2389648 |
Gene Length | 504 bp |
Protein Length | 167 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640600154 |
Product | peptidase |
Protein accession | YP_001280812 |
Protein GI | 148653719 |
COG category | [S] Function unknown |
COG ID | [COG3212] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00193807 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACCC TATCTGCTAT TGCAACATCA ATATTACTTA CCTTTGGTGC AGCCGCCCCA AGCTTTGCTG CTCCGACCAA AGCCGCTGTA GTACAAAGTC AGATCAATTT AAATCAAGCC ATCACAATCG CCAAACAAAA GGCGCAGGGT AAAGTCAAAA GTATCGATTT TGATAGCGAT GACTCAGAAT ATGAAGTGGA GCTGGCGTCT ACTAGCACCA AGTCCGAAGT CAAAATTAAT GCGCAAACCG GTGCAGTAAA TAGCCAAAAA CAAGAGCGCA TTGAGAGCAA AGATACGGCC AAATACCAAG CATTAAATAC TGCCAAGATT GACTTAGTCA AAGCGATTCA AATTGCCGCT GGTCATGGTC AAGTGCTAGA AGCTGAGTTT GATATCGACA AGGGCAGCGC TGTATATGAA GTAGAAACCC TTAGAAATGG TCAAAAATAT AAAGTGATTA TCGATGCCAA TACGGGCCGT GTTATCCAAA CTAAGCGTGA TTAA
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Protein sequence | MKTLSAIATS ILLTFGAAAP SFAAPTKAAV VQSQINLNQA ITIAKQKAQG KVKSIDFDSD DSEYEVELAS TSTKSEVKIN AQTGAVNSQK QERIESKDTA KYQALNTAKI DLVKAIQIAA GHGQVLEAEF DIDKGSAVYE VETLRNGQKY KVIIDANTGR VIQTKRD
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