8 homologs were found in PanDaTox collection
for query gene Strop_4121 on replicon NC_009380
Organism: Salinispora tropica CNB-440



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009380  Strop_4121  helix-turn-helix domain-containing protein  100 
 
 		 184 aa  374  1e-103  Salinispora tropica CNB-440  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009380  Strop_2311  helix-turn-helix domain-containing protein  94.08 
 
 		 424 aa  317  9e-86  Salinispora tropica CNB-440  Bacteria  normal  1  normal  0.4937 
 
 
-
 
NC_009380  Strop_4411  hypothetical protein  42.86 
 
 		 166 aa  67  0.0000000001  Salinispora tropica CNB-440  Bacteria  normal  1  normal  0.959952 
 
 
-
 
NC_009953  Sare_4886  hypothetical protein  44.74 
 
 		 250 aa  64.7  0.0000000008  Salinispora arenicola CNS-205  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013159  Svir_07960  Helix-turn-helix protein  28.12 
 
 		 444 aa  45.4  0.0004  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007333  Tfu_2778  helix-hairpin-helix DNA-binding motif-containing protein  39.06 
 
 		 401 aa  44.3  0.001  Thermobifida fusca YX  Bacteria  normal  1  n/a   
 
 
-
 
NC_009380  Strop_2020  hypothetical protein  95 
 
 		 350 aa  42.7  0.003  Salinispora tropica CNB-440  Bacteria  normal  0.115091  normal  0.412427 
 
 
-
 
NC_013947  Snas_2843  transcriptional regulator, XRE family  37.88 
 
 		 401 aa  42.4  0.003  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  0.397563 
 
 
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