Gene Strop_4121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_4121 
Symbol 
ID5060605 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4688038 
End bp4688592 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content66% 
IMG OID640476384 
Producthelix-turn-helix domain-containing protein 
Protein accessionYP_001160929 
Protein GI145596632 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGACCCGC AGCAACTCAA GGATGTGAAG CGGGCGCTTG GACGGCGGCT CGCCGCGTGG 
CGCAAGACGC GTGGTCTGAT TCAGGATGAC GTGGCGCGGC TGGTGAACAG CACTCGAAGC
ACGGTGGCCG GGGTCGAACG CGGCGAGCAG GTGGTCGACC GGGTCTTCTG GGTGCAGTGC
GAGTCACTTC TCCAGGCCGG CGGCGAGCTG ATCGCCGGCT ACGACGAGTA CCGGTCGTTC
GAGATCAGGC ATCGGGAGGA AAAGGCCGAC GCGGCACGCC ACGCCCGCTG GGGCACAGTC
CTCGATCACC AGACGATCAC CGAGGCCAGC TCCCCCAGCC GGCTTCCCGA TCCCGACAGG
CTGTTGCCGA CCACAGGTGC TTCCACTGGT GACTCAGTAT TGGTGCAGGA TCCGGGTGAA
GCGTACGTTG GGGTGCGGCA GGCGATCATG ATCGTCGCGC GGGAGACCAG CAAGCACGCG
ATGGACGCAG GGGCTAGTGC AGCCCCGCAT AAGTTCTTGA CGGGTCATGC GGCCTTGAGG
GGGCGGCCGT CGTAG
 
Protein sequence
MDPQQLKDVK RALGRRLAAW RKTRGLIQDD VARLVNSTRS TVAGVERGEQ VVDRVFWVQC 
ESLLQAGGEL IAGYDEYRSF EIRHREEKAD AARHARWGTV LDHQTITEAS SPSRLPDPDR
LLPTTGASTG DSVLVQDPGE AYVGVRQAIM IVARETSKHA MDAGASAAPH KFLTGHAALR
GRPS