Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_4121 |
Symbol | |
ID | 5060605 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 4688038 |
End bp | 4688592 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640476384 |
Product | helix-turn-helix domain-containing protein |
Protein accession | YP_001160929 |
Protein GI | 145596632 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGACCCGC AGCAACTCAA GGATGTGAAG CGGGCGCTTG GACGGCGGCT CGCCGCGTGG CGCAAGACGC GTGGTCTGAT TCAGGATGAC GTGGCGCGGC TGGTGAACAG CACTCGAAGC ACGGTGGCCG GGGTCGAACG CGGCGAGCAG GTGGTCGACC GGGTCTTCTG GGTGCAGTGC GAGTCACTTC TCCAGGCCGG CGGCGAGCTG ATCGCCGGCT ACGACGAGTA CCGGTCGTTC GAGATCAGGC ATCGGGAGGA AAAGGCCGAC GCGGCACGCC ACGCCCGCTG GGGCACAGTC CTCGATCACC AGACGATCAC CGAGGCCAGC TCCCCCAGCC GGCTTCCCGA TCCCGACAGG CTGTTGCCGA CCACAGGTGC TTCCACTGGT GACTCAGTAT TGGTGCAGGA TCCGGGTGAA GCGTACGTTG GGGTGCGGCA GGCGATCATG ATCGTCGCGC GGGAGACCAG CAAGCACGCG ATGGACGCAG GGGCTAGTGC AGCCCCGCAT AAGTTCTTGA CGGGTCATGC GGCCTTGAGG GGGCGGCCGT CGTAG
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Protein sequence | MDPQQLKDVK RALGRRLAAW RKTRGLIQDD VARLVNSTRS TVAGVERGEQ VVDRVFWVQC ESLLQAGGEL IAGYDEYRSF EIRHREEKAD AARHARWGTV LDHQTITEAS SPSRLPDPDR LLPTTGASTG DSVLVQDPGE AYVGVRQAIM IVARETSKHA MDAGASAAPH KFLTGHAALR GRPS
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