| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_07960 |
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| Symbol | |
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| ID | 8386133 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 816704 |
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| End bp | 818038 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644974887 |
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| Product | Helix-turn-helix protein |
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| Protein accession | YP_003132683 |
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| Protein GI | 257054851 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCGGG AACCCGAACC GATCCTCCGA CAGCGTCAGG CCCTGGGGGC CCAGCTGGCC
GCATTCCGTC AGGCCGCGGA TCTCACCCAG GGGCGGTTGG CCAAGGCCGC GCTCTGCGAT
CGCACGACAC TGGCCCACAT CGAGAAGGGG CGTGCCCGTG CCGACGAGCG GTTCTGGCGC
GCGTGTGACG AGGCCGTCGG CGCACACGGC GTGCTGTTGA GCGCGTTCCA CGACCTGGTG
GCCGCGAAGC AGGACTACGA ACAGCGGGAG AACCAACGAC GGCTCGCCCA GGCCCGGGTC
CGCGCGCAAC GGTTGAGTAC GAACGGACCT CCCGGCCCCG CCTCCGCGTC GTCGTTGTGC
GACGACGGGG AGGTGATCGA GTCCCCGGGC CCGCCCGTCC GGCTCGACGG TTCCTATGTC
GAGACACTCC ACAGTCGTAT CCGGGAGCTC GTCGAGCTCG ACATCCAGTT CGGCGGTGAT
CAATCCTCCG GTGTCGCGTT CCGGCTCTTC CGTTCCGTCC ACAGGAAATT GGGGACCGCT
CAGTGCGATC CCCGGGTCGA ACGTGACCTG TATGCGGCGA CCGGGGAGCT CGGTGAGGTC
GCCGGCTGGT TGCTCTACGA CGCGGGCCGA CACGGTCTGG TGCGTCGGGT CAACCACGAG
GCGTTGCATC TGTCCCGTTT GGCCGGTGAT CGCAGCATGG AACTGTTGAC GCTGCAGAAC
ATGTCCATGC ACGCCGGTCA CCTCGGCCGT CCCGTGGAGG CCCTGCGCAT CGCGCGTATG
GTGTTGGAGA CCAACAGGCT CTCACCCCGG CTGCAGGCGC TTTTCCGCAC CCGTGAGGCC
CGTGCCCTGG CGTTGGCGGG TGACGAGACC GCGGCCAAAC GGACCTTCCG TCGGGCTCGT
TCGTTGTATT TGGATGGTGT GCGGGACGAC GACCCGGCAT GGGCCTGGTG GATCAACGAC
CAGGAACTGG CCTGGCACGA GGCCATGATC CACGCCGACT CCGACGAATG GGAACGTGCC
GCCGACCTCT TCGAGACCTC GATCGAGGTC ACTCCCGGCC GTGAGGTCCG ACGGCGCTAC
AACCATCTCG CCTCCCTGTT CGACGCGCAG GTCCACGCAC AAGCCTGGTG CGATGCGGGC
CGGACCATCG AACGCATCAT GCCGTTCGTC GACGAGGTCG GTTCGACCCG AACCGCGACC
ACGTTGTGGG GCGCGCTCGA CAAACTCGAC GCCACCCGTC CCACCTCGAC ACTGCGCGAA
GCCGCCCACC AGTTGCGGAG TGTGCTGACC GACGCCGGAT ACGGCCCCCT GGACACAGAC
CACGGTGTGA GCTGA
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| Protein sequence | MAREPEPILR QRQALGAQLA AFRQAADLTQ GRLAKAALCD RTTLAHIEKG RARADERFWR
ACDEAVGAHG VLLSAFHDLV AAKQDYEQRE NQRRLAQARV RAQRLSTNGP PGPASASSLC
DDGEVIESPG PPVRLDGSYV ETLHSRIREL VELDIQFGGD QSSGVAFRLF RSVHRKLGTA
QCDPRVERDL YAATGELGEV AGWLLYDAGR HGLVRRVNHE ALHLSRLAGD RSMELLTLQN
MSMHAGHLGR PVEALRIARM VLETNRLSPR LQALFRTREA RALALAGDET AAKRTFRRAR
SLYLDGVRDD DPAWAWWIND QELAWHEAMI HADSDEWERA ADLFETSIEV TPGREVRRRY
NHLASLFDAQ VHAQAWCDAG RTIERIMPFV DEVGSTRTAT TLWGALDKLD ATRPTSTLRE
AAHQLRSVLT DAGYGPLDTD HGVS
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