9 homologs were found in PanDaTox collection
for query gene Ssed_4180 on replicon NC_009831
Organism: Shewanella sediminis HAW-EB3



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009831  Ssed_4180  hypothetical protein  100 
 
 		 246 aa  516  1.0000000000000001e-145  Shewanella sediminis HAW-EB3  Bacteria  normal  1  normal  0.745034 
 
 
-
 
NC_004347  SO_3622  hypothetical protein  88.62 
 
 		 247 aa  471  1e-132  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009901  Spea_0321  cupin 2 domain-containing protein  33.64 
 
 		 247 aa  121  9.999999999999999e-27  Shewanella pealeana ATCC 700345  Bacteria  normal  1  n/a   
 
 
-
 
NC_009092  Shew_0272  cupin 2 domain-containing protein  33.64 
 
 		 247 aa  114  1.0000000000000001e-24  Shewanella loihica PV-4  Bacteria  normal  0.181215  unclonable  0.0000021691 
 
 
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NC_009831  Ssed_4188  cupin 2 domain-containing protein  36.31 
 
 		 247 aa  114  1.0000000000000001e-24  Shewanella sediminis HAW-EB3  Bacteria  normal  0.36291  normal  0.581654 
 
 
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NC_008321  Shewmr4_0303  hypothetical protein  31.34 
 
 		 247 aa  106  3e-22  Shewanella sp. MR-4  Bacteria  normal  0.0873934  normal  0.366193 
 
 
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NC_009665  Shew185_2538  hypothetical protein  32.4 
 
 		 247 aa  102  5e-21  Shewanella baltica OS185  Bacteria  normal  0.0134025  n/a   
 
 
-
 
NC_004347  SO_1410  hypothetical protein  32.96 
 
 		 242 aa  102  6e-21  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007604  Synpcc7942_2200  hypothetical protein  32.76 
 
 		 163 aa  42.4  0.007  Synechococcus elongatus PCC 7942  Bacteria  normal  1  normal  0.192403 
 
 
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