| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_4188 |
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| Symbol | |
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| ID | 5612157 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 5147769 |
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| End bp | 5148512 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640935147 |
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| Product | cupin 2 domain-containing protein |
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| Protein accession | YP_001475920 |
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| Protein GI | 157377320 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.36291 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.581654 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAAAC TTAAAATGAT GTTCGGCCTT GCCGCGCTAG CTTCAACCAC AGCATTAGCT
GCGGGTCCAC AGTGTAACCA TGCACAGCTA CCATTCCAGC AGATGACGCC GGTTCCATAT
GACAGCACGC CATACTCACC ACAAGATACT ATGCCAGCCC AGTGTAGCGA TCCTATGGTC
GAAGCCTATA TTGCCGATTG GGAAGCGGGT AAAATCGATT TTAACAGCAT CAAGTCAAAT
GACAGCATTG CCGTAGATCA GCGTTTCTGT AAGACCATGG ACGATGACGG CAACATCATG
GAAGCCAAGA ACTGTGACCT GAAAAATGCG CCGGTTGGCT ATCTTTGGAA AGAGCTTTCA
GACAGCCCAA TGGTAATGGG TATCACCAAC GGCGGTAAGT CGGATCACGC ACCTCACTTC
CATGGCCAAC CTGAGTGTTA CTATGTCGTT AACGGTGAAG GCAAGACCCT TGCCGACAAC
AAGTTCCAAA CCTTAGGAAC GGGCCAATAC TTCTACATTC CTGGTGCCAC CATTCACAAC
ACACCTATCA TGAGCGATAA AGGTTTAGGT GTGATGTACT GGTATCCAAA GAATGCACAT
TTCGATGGCT TCAAGTACTA CTGGCGTAAA GATGTGAAGA ACCTTCGCGT TGCAGAAGAA
GCATTCGATC GTGTGGATGA GATCCGTAAA CGCGACCTAA ACTTAGGTCC ATATGGTACT
AACGAAGCTT TCTTCAAGAA GTAA
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| Protein sequence | MMKLKMMFGL AALASTTALA AGPQCNHAQL PFQQMTPVPY DSTPYSPQDT MPAQCSDPMV
EAYIADWEAG KIDFNSIKSN DSIAVDQRFC KTMDDDGNIM EAKNCDLKNA PVGYLWKELS
DSPMVMGITN GGKSDHAPHF HGQPECYYVV NGEGKTLADN KFQTLGTGQY FYIPGATIHN
TPIMSDKGLG VMYWYPKNAH FDGFKYYWRK DVKNLRVAEE AFDRVDEIRK RDLNLGPYGT
NEAFFKK
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