10 homologs were found in PanDaTox collection
for query gene Slin_2414 on replicon NC_013730
Organism: Spirosoma linguale DSM 74



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013730  Slin_2414  hypothetical protein  100 
 
 
377 aa  777    Spirosoma linguale DSM 74  Bacteria  normal  normal  0.881314 
 
 
-
 
NC_010001  Cphy_0770  hypothetical protein  31.29 
 
 
351 aa  136  6.0000000000000005e-31  Clostridium phytofermentans ISDg  Bacteria  normal  0.0110941  n/a   
 
 
-
 
NC_009441  Fjoh_4231  hypothetical protein  29.15 
 
 
368 aa  134  3.9999999999999996e-30  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_0933  hypothetical protein  27.02 
 
 
350 aa  109  1e-22  Clostridium phytofermentans ISDg  Bacteria  normal  0.485961  n/a   
 
 
-
 
NC_007912  Sde_2657  hypothetical protein  29.89 
 
 
368 aa  68.9  0.0000000001  Saccharophagus degradans 2-40  Bacteria  hitchhiker  0.000214903  normal 
 
 
-
 
NC_008228  Patl_1968  hypothetical protein  30.81 
 
 
361 aa  63.9  0.000000004  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.0318887  n/a   
 
 
-
 
NC_008228  Patl_0812  hypothetical protein  27.03 
 
 
430 aa  54.7  0.000003  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.612634  n/a   
 
 
-
 
NC_013037  Dfer_0193  glycoside hydrolase family 43  30 
 
 
324 aa  44.7  0.002  Dyadobacter fermentans DSM 18053  Bacteria  decreased coverage  0.00680352  normal  0.581709 
 
 
-
 
NC_013132  Cpin_6730  glycoside hydrolase family 43  28.33 
 
 
323 aa  44.3  0.003  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.575675  normal  0.920031 
 
 
-
 
NC_010717  PXO_01459  xylosidase; arabinosidase  24.44 
 
 
527 aa  43.1  0.007  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.928055  n/a   
 
 
-
 
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