| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6730 |
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| Symbol | |
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| ID | 8362921 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 8430021 |
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| End bp | 8430992 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644968862 |
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| Product | glycoside hydrolase family 43 |
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| Protein accession | YP_003126332 |
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| Protein GI | 256425679 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3507] Beta-xylosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.575675 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.920031 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGAAAGG TCTTAACATT GTTATTACTG GCAGCAGCTG CCACTTTACC CGCAGCCGCC
CAAAAAACGT CCGGTAATCC TATCATGCAG GGATGGTACG CTGATCCTGA AGCAGTTATA
TGGGGTAAAG AGTATTGGGT ATATCCTACA TTTTCAGACA AATATGAGAA ACAGGTGTTT
TTTGATGCCT TTTCTTCCCG GGACCTGATT AAATGGACTA AACATCCACA CATTCTGGAT
ACGGCAGCCG TAAAATGGGC AAAAAAGGCG ATGTGGGCGC CGGCTATCGT AAAGAAAGAC
AGCAAATACT ACTTCTTCTT TGCCGCCAAT GATATCCAGA GTGATAACGA AGAAGGTGGT
ATCGGTGTAG CAGTAGCTGA TAAACCAGGA GGTCCTTATA AAGACCATAT CGGTAAACCA
CTGATTGACA AATTCCATAA TAAGGCACAA CCGATCGACC AATTCGTTTT TCATGACAAA
GACGGACAAT ACTATATTAT ATATGGTGGA TGGCGTCATT GTAACATCGC AAAACTGAAC
AACGACTTTA AAGGATTCAC GCCTTTTGAA GACGGTAATA CCTTTAAGGA AATAACGCCT
GCCGGTTATG TGGAAGGACC ATTTATGTTC ATACGCAATG GTAAATATTA TTTCATGTGG
TCAGAAGGTG GCTGGGGTGG CCCGGAATAT TCCGTTGCCT ATGCTATCGC TGATTCTCCG
GTAGGTCCTT TCAAACGTAT TGGTAAGATC CTGCAACAGG ATACATCCGT AGCTACCAGC
GCAGGTCACC ATTCTGTAGT AAACGTACCG GGAACAGACC GTTGGTATAT TATCTACCAC
AGACGTCCGC TGACAGAAAC TGCTGCTAAC AACCGCGTCG TATGTATTGA TGAAATGCAT
TTTGACGAGA ATGGATTAAT CGTTCCTGTG AAGATCACAA AAGAGGGCGT TAAAGCAGAT
AAACTGAAAT AA
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| Protein sequence | MRKVLTLLLL AAAATLPAAA QKTSGNPIMQ GWYADPEAVI WGKEYWVYPT FSDKYEKQVF
FDAFSSRDLI KWTKHPHILD TAAVKWAKKA MWAPAIVKKD SKYYFFFAAN DIQSDNEEGG
IGVAVADKPG GPYKDHIGKP LIDKFHNKAQ PIDQFVFHDK DGQYYIIYGG WRHCNIAKLN
NDFKGFTPFE DGNTFKEITP AGYVEGPFMF IRNGKYYFMW SEGGWGGPEY SVAYAIADSP
VGPFKRIGKI LQQDTSVATS AGHHSVVNVP GTDRWYIIYH RRPLTETAAN NRVVCIDEMH
FDENGLIVPV KITKEGVKAD KLK
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