26 homologs were found in PanDaTox collection
for query gene Shewana3_3347 on replicon NC_008577
Organism: Shewanella sp. ANA-3



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008577  Shewana3_3347  transcriptional regulator  100 
 
 
249 aa  514  1.0000000000000001e-145  Shewanella sp. ANA-3  Bacteria  normal  0.730311  normal 
 
 
-
 
NC_008321  Shewmr4_0779  response regulator receiver protein  84.74 
 
 
249 aa  426  1e-118  Shewanella sp. MR-4  Bacteria  normal  0.365042  normal 
 
 
-
 
NC_008322  Shewmr7_3244  response regulator receiver protein  84.74 
 
 
249 aa  422  1e-117  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_0936  transcriptional regulator  46.37 
 
 
248 aa  236  2e-61  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009831  Ssed_0879  hypothetical protein  27.09 
 
 
248 aa  116  3e-25  Shewanella sediminis HAW-EB3  Bacteria  hitchhiker  0.00268947  normal 
 
 
-
 
NC_010506  Swoo_0881  putative transcriptional regulator, CadC  26.91 
 
 
246 aa  112  6e-24  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3240  lysine decarboxylase transcriptional regulator, CadC  27.2 
 
 
247 aa  103  2e-21  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_3343  lysine decarboxylase transcriptional regulator, CadC  27.78 
 
 
247 aa  102  4e-21  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_0783  lysine decarboxylase transcriptional regulator, CadC  27.2 
 
 
247 aa  102  7e-21  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_0940  transcriptional regulator-related protein  26.4 
 
 
247 aa  100  2e-20  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009438  Sputcn32_0880  transcriptional regulator, CadC  27.09 
 
 
247 aa  95.5  8e-19  Shewanella putrefaciens CN-32  Bacteria  normal  0.102623  n/a   
 
 
-
 
NC_008345  Sfri_0653  hypothetical protein  26 
 
 
248 aa  92.8  4e-18  Shewanella frigidimarina NCIMB 400  Bacteria  hitchhiker  0.00719508  n/a   
 
 
-
 
NC_008700  Sama_2749  putative transcriptional regulator, CadC  26.48 
 
 
251 aa  80.9  0.00000000000002  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_3438  winged helix family two component response transcriptional regulator  25.3 
 
 
250 aa  80.1  0.00000000000003  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_0883  response regulator receiver protein  24 
 
 
244 aa  80.5  0.00000000000003  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_3534  transcriptional regulator, CadC  23.6 
 
 
249 aa  75.9  0.0000000000006  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_0885  transcriptional regulator, CadC  25.79 
 
 
246 aa  74.3  0.000000000001  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_3459  transcriptional regulator, CadC  23.2 
 
 
249 aa  72.8  0.000000000005  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_0833  transcriptional regulator, CadC  23.2 
 
 
249 aa  72.8  0.000000000005  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_0757  putative transcriptional regulator, CadC  33.06 
 
 
151 aa  69.3  0.00000000006  Shewanella loihica PV-4  Bacteria  normal  0.19634  normal 
 
 
-
 
NC_009997  Sbal195_3653  transcriptional regulator, CadC  22.4 
 
 
249 aa  68.6  0.00000000009  Shewanella baltica OS195  Bacteria  normal  0.409424  normal 
 
 
-
 
NC_008345  Sfri_3632  response regulator receiver protein  23.14 
 
 
265 aa  64.3  0.000000002  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_0793  putative transcriptional regulator, CadC  20.16 
 
 
248 aa  54.7  0.000001  Shewanella pealeana ATCC 700345  Bacteria  normal  0.790637  n/a   
 
 
-
 
NC_009092  Shew_0760  response regulator receiver protein  22.18 
 
 
273 aa  48.9  0.00007  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_2752  hypothetical protein  32.08 
 
 
137 aa  47.8  0.0002  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_4083  two component transcriptional regulator  42.11 
 
 
223 aa  42  0.009  Acidovorax sp. JS42  Bacteria  normal  normal  0.193454 
 
 
-
 
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