| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0883 |
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| Symbol | |
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| ID | 5613590 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1051175 |
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| End bp | 1051909 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640931731 |
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| Product | response regulator receiver protein |
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| Protein accession | YP_001472622 |
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| Protein GI | 157374022 |
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| COG category | [K] Transcription |
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| COG ID | [COG3710] DNA-binding winged-HTH domains |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATTGG GCAGTTGTCA GTTTGATATT GAGCGAGCGC AACTAACGAA TCTGGAAAAT
GGCGATGTTT GGCACTTACC CAGGGCCGAG TTACAAGTAC TTAAGTTACT TATTGCCAAT
CGTAACAGGA TTGTTGCGAA GCAGAAATTA GGTGCTGCCG ATGAAGAGCA CCCCCCTTTA
AGTGATTCTT CCGTGACTCG CGCCGTATTT ATGTTGCGCT CTTTCTTGGG GCCGGAACAC
GAGCAGTTGA TTGAAACGGT AAAGAGTAAA GGTTATCGGC TACGGGGCGA AGCTAAACGT
ACCCAATGGG CACAGATGGT CAAACTCAAG CGTGGCTTGA TCCTGGCCTT GATGATTGTC
TGTATATTCG CATCCATAGG ACTCGTTACC CAGTTTTCAA AGTGTGGTTC GACTACCGAA
CCATACAATG TTACTCCGAT AACTCTCTTG TCCGGTCAAC AGATAAACTT AATCAGTTAC
TCTAAATCGA AGACAAATAC TGAGTCATTG ATGAGTGTTA TCACGCAATT TTCTGCCGGA
TTCAAAGGGT GTTATTCGGC GCCCTGGCAA GATATCTATC TATCTTTATC CCATGATGAG
CAGGTGTTTA ATATCACCAT GAGAGGGGAG AAGTTGGGCC AGTCGGTGGT GAGAAACCTT
AAGTTATCTG ACTTTCGCCA ACAGAAACAA TTTATCTCTG AAGCTTGGTT AGATGAGGTG
GCGCTTTGTG AATAG
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| Protein sequence | MQLGSCQFDI ERAQLTNLEN GDVWHLPRAE LQVLKLLIAN RNRIVAKQKL GAADEEHPPL
SDSSVTRAVF MLRSFLGPEH EQLIETVKSK GYRLRGEAKR TQWAQMVKLK RGLILALMIV
CIFASIGLVT QFSKCGSTTE PYNVTPITLL SGQQINLISY SKSKTNTESL MSVITQFSAG
FKGCYSAPWQ DIYLSLSHDE QVFNITMRGE KLGQSVVRNL KLSDFRQQKQ FISEAWLDEV
ALCE
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