| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2749 |
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| Symbol | |
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| ID | 4604996 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3287918 |
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| End bp | 3288673 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639782160 |
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| Product | putative transcriptional regulator, CadC |
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| Protein accession | YP_928621 |
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| Protein GI | 119775881 |
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| COG category | [K] Transcription |
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| COG ID | [COG3710] DNA-binding winged-HTH domains |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATTGG GTAATTGCTG GTTTGATGAT GCCAAAGGGG AGCTGATTAA TCGCGCCTCC
GGTGACGTCT GGCATTTGCC CCGGGCGGAA GCGCAGGTGC TTCGACTCTT GCTGAGCCAG
GCCGATCGGG TGGTCTCCAA GGCAGAGCTG CGTCAGGGCG ACGATGAACA TGGCGAGCTC
AGTGATTCAT CGGTGGCACG GGCTGTGTTC ATGATCCGCT CCTTTCTTGG CCCCGGCAGC
GAACTGCTGA TTGAAACCGT CAAGGGGCAG GGGTATCGAT TGCACCTGAC CCCCATGACA
GCCCCAGTGC CGGCCAAGAG GCGGCTGCCA ATCCGCCGTC TGGGGCCTGT GCCCATCTGG
ATCCCGGCGT TGTTGATGTT GGCATCCCTG TTTGCCGGTG GCTATTTTGC CCTGCGGGTG
GGGGAAATGT CCCCCACAGC ACCGCTAAAG GTGCAGTCGG TGGTGCAGGC CGACGGCCAG
ATGGTCAAGT TGGTGCTTTA TGCCCATTCC CGCAGTAACA ATACCCTCTT GCTTGAAAAA
GCGTCCGAGC TGGCATCTGT ATTGGGTGAT TGTCGCCATT CCCGCTGGCG CGAAGTGTTT
ATGTCGTTAA GCCACGACTC CCGGGTATTG AATCTCACCC TGAGGGGCGA TTATTTGGGG
CAGGCAGTGG TACGAAACCT GAAAGTTAGC GATGGCCGCA GCCCCAGGCG GTTTATCAGT
CCCGACTGGC TCAGAGAGGT GGACATCTGT GACTAG
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| Protein sequence | MQLGNCWFDD AKGELINRAS GDVWHLPRAE AQVLRLLLSQ ADRVVSKAEL RQGDDEHGEL
SDSSVARAVF MIRSFLGPGS ELLIETVKGQ GYRLHLTPMT APVPAKRRLP IRRLGPVPIW
IPALLMLASL FAGGYFALRV GEMSPTAPLK VQSVVQADGQ MVKLVLYAHS RSNNTLLLEK
ASELASVLGD CRHSRWREVF MSLSHDSRVL NLTLRGDYLG QAVVRNLKVS DGRSPRRFIS
PDWLREVDIC D
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