14 homologs were found in PanDaTox collection
for query gene Shew_3276 on replicon NC_009092
Organism: Shewanella loihica PV-4



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009092  Shew_3276  hypothetical protein  100 
 
 		 429 aa  867    Shewanella loihica PV-4  Bacteria  normal  1  unclonable  0.00000341195 
 
 
-
 
NC_009831  Ssed_0764  hypothetical protein  56.73 
 
 		 450 aa  488  1e-137  Shewanella sediminis HAW-EB3  Bacteria  normal  0.798576  unclonable  0.000000000101633 
 
 
-
 
NC_010506  Swoo_4205  hypothetical protein  60.78 
 
 		 440 aa  483  1e-135  Shewanella woodyi ATCC 51908  Bacteria  normal  1  decreased coverage  0.000000231794 
 
 
-
 
NC_009901  Spea_3579  hypothetical protein  54.11 
 
 		 420 aa  446  1.0000000000000001e-124  Shewanella pealeana ATCC 700345  Bacteria  hitchhiker  0.00756138  n/a   
 
 
-
 
NC_011312  VSAL_I0384  hypothetical protein  42.65 
 
 		 406 aa  313  2.9999999999999996e-84  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.13512  n/a   
 
 
-
 
NC_009783  VIBHAR_00015  hypothetical protein  44.35 
 
 		 336 aa  287  2.9999999999999996e-76  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_003910  CPS_3224  hypothetical protein  27.32 
 
 		 444 aa  137  5e-31  Colwellia psychrerythraea 34H  Bacteria  normal  0.050475  n/a   
 
 
-
 
NC_009092  Shew_0482  hypothetical protein  26.64 
 
 		 388 aa  69.7  0.00000000009  Shewanella loihica PV-4  Bacteria  decreased coverage  0.00000379744  normal  1 
 
 
-
 
NC_010506  Swoo_0541  hypothetical protein  24.78 
 
 		 388 aa  61.6  0.00000003  Shewanella woodyi ATCC 51908  Bacteria  normal  0.0408675  normal  1 
 
 
-
 
NC_009901  Spea_3666  hypothetical protein  30.97 
 
 		 388 aa  59.3  0.0000001  Shewanella pealeana ATCC 700345  Bacteria  normal  1  n/a   
 
 
-
 
NC_008345  Sfri_2138  hypothetical protein  25.66 
 
 		 382 aa  58.5  0.0000002  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_009831  Ssed_0660  hypothetical protein  30.09 
 
 		 388 aa  58.9  0.0000002  Shewanella sediminis HAW-EB3  Bacteria  decreased coverage  0.0000211177  normal  1 
 
 
-
 
NC_011312  VSAL_I0268  hypothetical protein  26.03 
 
 		 383 aa  57  0.0000006  Aliivibrio salmonicida LFI1238  Bacteria  normal  1  n/a   
 
 
-
 
NC_010814  Glov_3409  surface antigen (D15)  25.2 
 
 		 430 aa  49.7  0.0001  Geobacter lovleyi SZ  Bacteria  normal  1  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>