| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0482 |
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| Symbol | |
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| ID | 4922959 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 539397 |
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| End bp | 540563 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640162011 |
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| Product | hypothetical protein |
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| Protein accession | YP_001092613 |
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| Protein GI | 127511416 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4775] Outer membrane protein/protective antigen OMA87 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000379744 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGGA TTTTATGCTT GTCCCTGCTG GCCTTTTCTC AAATGGCCGC CGCCGTAGAG
CCCCTGATTG AAACGCCAAA AGATATGCAG CCTACCTGGG TCGATGAGAT CCTGGACGTC
TTCGGCGCCG ACGGTGAGTT TGACGAGAGC AAGACCATAG ACATGAGCTA CCTGCCGACC
GCCTATTACA CGCCTGAGAA GAAATTCGGC GTGGGCCTCC TGATGGTGGG CCTGTATAAG
ACAGATGGCG CGGCGCCCGA GGAGCAACCT TCCTCTTTGG TGCTGAACTC CTTCGTGTCG
ATGAACAACT CCTACGGCGT CGAAGTGGAA AACATGACCT TCTTCAACGG CGGCAAGCAG
CGTCTGCTGC TGGGGCTGGA GCTGCATAAC GAGGCGTCTG TCTACTACGG CCGTGGCATA
GCAGACGGTA ACATCGACAG CAATCACCAT GAGTTCGACG AGCAGCTCTA CAGCTTCACG
CCGCGCTGGA TGACCCAGGT GGCCGACAAC TATTTTGTTG GTGTGGGCGT CGACTTCACC
TACGCCAGTG CCGACAAGTT CACTCGGGTA GAGGGTGATA TTCCCCTGCC ATCCGACGGC
ATCTTGCCAA GCAACTTCAG CTCCGGCCTG GTGGTCACCA GCATCTATGA TTCCCGCGAC
TACCGCCTCA ACGCCACCAA GGGCTGGTTG TTCCAGCTCG ATGCGGGCCT GTATCAAAAC
AGCGAGTACG ACAGCTTCGC CAAGTATGAC CTCGAGCTGG CCAACTATAT CGATCTCAGC
ACCACCTCAT GGCTTAGCCA GATGCCTGGC CTAATCGCCT GGCAGGTGCA GGGCCACTTC
ACCAGCGGCG ATGTACCCTG GAACATGCTG CCGGATCTTG GCGGTTCCAG CGCCATGCGC
GGCTACATCA AGGGCCGCTA CCGTGACAAG CAGATGATGA TGGGCCAAGT CGAGTACCGT
CTGCCTATCT TCCAGCGTTA CGGCATGGTG TTCTGGGGCG GCGTGGGTAG CGTGGCCGAC
AAGGTGAGCG ATCTTAACGA TGAGCTGCTG ACCTCTTACG GCACAGGTTT CCGCTTTAAG
ATCAAAGACA ACATCAACCT GCGTCTGGAT GTGGGTGTCG GCGAGAACGA GACCAACTTC
TACCTCAACG TCAACGAAGT CTTCTAG
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| Protein sequence | MKRILCLSLL AFSQMAAAVE PLIETPKDMQ PTWVDEILDV FGADGEFDES KTIDMSYLPT
AYYTPEKKFG VGLLMVGLYK TDGAAPEEQP SSLVLNSFVS MNNSYGVEVE NMTFFNGGKQ
RLLLGLELHN EASVYYGRGI ADGNIDSNHH EFDEQLYSFT PRWMTQVADN YFVGVGVDFT
YASADKFTRV EGDIPLPSDG ILPSNFSSGL VVTSIYDSRD YRLNATKGWL FQLDAGLYQN
SEYDSFAKYD LELANYIDLS TTSWLSQMPG LIAWQVQGHF TSGDVPWNML PDLGGSSAMR
GYIKGRYRDK QMMMGQVEYR LPIFQRYGMV FWGGVGSVAD KVSDLNDELL TSYGTGFRFK
IKDNINLRLD VGVGENETNF YLNVNEVF
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