Gene Swoo_0541 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0541 
Symbol 
ID6114775 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp764513 
End bp765679 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content45% 
IMG OID641632027 
Producthypothetical protein 
Protein accessionYP_001758932 
Protein GI170724906 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0408675 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGGA TTTTACTGTT AACCCTGTTT GCTTTTTCTA ATGCGGCGAT TGCCGTAGAA 
CCTCTGTTTG AAACCCCAAA AGATATGGAG CCAACTTGGG TGGACGATAT TTTGTCTGTC
TTTGGTGCAG ATGGTGAGTT TGATGAGAGC AAAGCCATTG ATATGAGCTA TCTTCCAACA
GCTTATTACA CGCCGGAGAA GAAGTTTGGG GTTGGCCTTT TGATGGTTGG CCTATATAAA
ACCGACGGTG CTTCGGCACA GGAGCAGCCC TCATCTTTGG TGCTGAATTC ATTTGTTTCG
ATGAACAACT CCTACGGCGT TGAAGTTGAA AATATGACCT TTTTTAACGG CGGTAAGCAA
AGGTTATTAT TGGAACTAGA GCTTCACAAT GAAGCATCTG TTTATTATGG CCAAGGGATA
GAACAAGGTC ACTTAGACAG TAACCACCAT GAGTTTGAGG AGCAGCTATA CAGCTTTAAA
CCTCGTTGGA TGACTGAAGT TGCCGATAAC TACTTTGTCG GTGTGGGTGC CAATTTTGTC
TACGCCAGCG CAGACAAGTT TCAGTTAGCT GAAACAGAGG TACCTGTTGA TTCCAGTACT
ATTTTGCCTG ATAACGTCAG CTCAGGCGTG GTGGTGACCA GTATTTATGA CTCGCGAGAT
TATCGTTTAA ATGCCACCAA AGGTTGGTTA TTTCAAATCG ACGCGGGCTT ATATCAAAAC
AGTGAATACG CTTCGTTTTC GACCTATGAT CTTGAGTTGG CCAATTACAT CGATTTAAGT
TCTACCTCCA TTTTGAGCTC AGCACCTGGA TTAATTGCAT GGCAGCTACA GGGGCATTTT
ACCGATGGCG ATGTGCCTTG GAACATGCTA CCTGACTTAG GTGGCTCTAA CGCCATGCGT
GGTTATATTA AGGGGCGCTA CCGTGACGAG CAGATGATGA TGGGGCAAGT TGAGTATCGC
TTACCTATAT TCCAGCGTTA CGGCATGGTT TTCTGGGGCG CAGCTGGAAG CGTCGCACCT
AAGATAGGTG ATCTGACCGA TGAGCTATTA ACCTCCTACG GAACCGGCTT CCGCTTTAAG
ATTAAAGATA ATATCAATCT GCGTCTTGAT GTGGGCGTGG GTGAAAATGA GACCAACTTC
TACCTGAATG TGAACGAAGT TTTTTGA
 
Protein sequence
MKRILLLTLF AFSNAAIAVE PLFETPKDME PTWVDDILSV FGADGEFDES KAIDMSYLPT 
AYYTPEKKFG VGLLMVGLYK TDGASAQEQP SSLVLNSFVS MNNSYGVEVE NMTFFNGGKQ
RLLLELELHN EASVYYGQGI EQGHLDSNHH EFEEQLYSFK PRWMTEVADN YFVGVGANFV
YASADKFQLA ETEVPVDSST ILPDNVSSGV VVTSIYDSRD YRLNATKGWL FQIDAGLYQN
SEYASFSTYD LELANYIDLS STSILSSAPG LIAWQLQGHF TDGDVPWNML PDLGGSNAMR
GYIKGRYRDE QMMMGQVEYR LPIFQRYGMV FWGAAGSVAP KIGDLTDELL TSYGTGFRFK
IKDNINLRLD VGVGENETNF YLNVNEVF