25 homologs were found in PanDaTox collection
for query gene Shew_0757 on replicon NC_009092
Organism: Shewanella loihica PV-4



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009092  Shew_0757  putative transcriptional regulator, CadC  100 
 
 		 151 aa  311  2.9999999999999996e-84  Shewanella loihica PV-4  Bacteria  normal  0.19634  normal  1 
 
 
-
 
NC_009831  Ssed_0879  hypothetical protein  48.18 
 
 		 248 aa  142  1e-33  Shewanella sediminis HAW-EB3  Bacteria  hitchhiker  0.00268947  normal  1 
 
 
-
 
NC_010506  Swoo_0881  putative transcriptional regulator, CadC  43.15 
 
 		 246 aa  124  5e-28  Shewanella woodyi ATCC 51908  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008321  Shewmr4_0783  lysine decarboxylase transcriptional regulator, CadC  44.44 
 
 		 247 aa  76.6  0.00000000000009  Shewanella sp. MR-4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008345  Sfri_0653  hypothetical protein  31.91 
 
 		 248 aa  77  0.00000000000009  Shewanella frigidimarina NCIMB 400  Bacteria  hitchhiker  0.00719508  n/a   
 
 
-
 
NC_008321  Shewmr4_0779  response regulator receiver protein  34.71 
 
 		 249 aa  75.9  0.0000000000002  Shewanella sp. MR-4  Bacteria  normal  0.365042  normal  1 
 
 
-
 
NC_008322  Shewmr7_3244  response regulator receiver protein  34.71 
 
 		 249 aa  75.5  0.0000000000002  Shewanella sp. MR-7  Bacteria  normal  1  normal  1 
 
 
-
 
NC_004347  SO_0940  transcriptional regulator-related protein  42.42 
 
 		 247 aa  75.1  0.0000000000003  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008322  Shewmr7_3240  lysine decarboxylase transcriptional regulator, CadC  43.88 
 
 		 247 aa  75.1  0.0000000000003  Shewanella sp. MR-7  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008577  Shewana3_3343  lysine decarboxylase transcriptional regulator, CadC  43.88 
 
 		 247 aa  75.1  0.0000000000003  Shewanella sp. ANA-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009438  Sputcn32_0880  transcriptional regulator, CadC  42.99 
 
 		 247 aa  75.5  0.0000000000003  Shewanella putrefaciens CN-32  Bacteria  normal  0.102623  n/a   
 
 
-
 
NC_008577  Shewana3_3347  transcriptional regulator  33.06 
 
 		 249 aa  68.2  0.00000000004  Shewanella sp. ANA-3  Bacteria  normal  0.730311  normal  1 
 
 
-
 
NC_008700  Sama_2749  putative transcriptional regulator, CadC  38.02 
 
 		 251 aa  63.9  0.0000000008  Shewanella amazonensis SB2B  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008345  Sfri_3632  response regulator receiver protein  37.89 
 
 		 265 aa  62.8  0.000000001  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_009831  Ssed_0883  response regulator receiver protein  28.57 
 
 		 244 aa  60.8  0.000000007  Shewanella sediminis HAW-EB3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009901  Spea_3438  winged helix family two component response transcriptional regulator  31.88 
 
 		 250 aa  59.7  0.00000001  Shewanella pealeana ATCC 700345  Bacteria  normal  1  n/a   
 
 
-
 
NC_009665  Shew185_3534  transcriptional regulator, CadC  35.71 
 
 		 249 aa  58.5  0.00000003  Shewanella baltica OS185  Bacteria  normal  1  n/a   
 
 
-
 
NC_009997  Sbal195_3653  transcriptional regulator, CadC  34.53 
 
 		 249 aa  58.2  0.00000004  Shewanella baltica OS195  Bacteria  normal  0.409424  normal  1 
 
 
-
 
NC_011663  Sbal223_3459  transcriptional regulator, CadC  34.53 
 
 		 249 aa  57.8  0.00000005  Shewanella baltica OS223  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009052  Sbal_0833  transcriptional regulator, CadC  34.53 
 
 		 249 aa  57.8  0.00000005  Shewanella baltica OS155  Bacteria  normal  1  n/a   
 
 
-
 
NC_004347  SO_0936  transcriptional regulator  30.95 
 
 		 248 aa  56.6  0.0000001  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_010506  Swoo_0885  transcriptional regulator, CadC  36.96 
 
 		 246 aa  56.6  0.0000001  Shewanella woodyi ATCC 51908  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008700  Sama_2752  hypothetical protein  32.35 
 
 		 137 aa  51.6  0.000004  Shewanella amazonensis SB2B  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013093  Amir_0840  Uroporphyrinogen III synthase HEM4  37.35 
 
 		 381 aa  42.4  0.003  Actinosynnema mirum DSM 43827  Bacteria  unclonable  0.0000000157223  n/a   
 
 
-
 
NC_009092  Shew_0760  response regulator receiver protein  34.02 
 
 		 273 aa  40.8  0.007  Shewanella loihica PV-4  Bacteria  normal  1  normal  1 
 
 
-
 
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