24 homologs were found in PanDaTox collection
for query gene Sfri_3632 on replicon NC_008345
Organism: Shewanella frigidimarina NCIMB 400



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008345  Sfri_3632  response regulator receiver protein  100 
 
 		 265 aa  542  1e-153  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_009901  Spea_3438  winged helix family two component response transcriptional regulator  58.66 
 
 		 250 aa  289  3e-77  Shewanella pealeana ATCC 700345  Bacteria  normal  1  n/a   
 
 
-
 
NC_004347  SO_0940  transcriptional regulator-related protein  49 
 
 		 247 aa  229  3e-59  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008700  Sama_2749  putative transcriptional regulator, CadC  47.47 
 
 		 251 aa  228  7e-59  Shewanella amazonensis SB2B  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008322  Shewmr7_3240  lysine decarboxylase transcriptional regulator, CadC  48.59 
 
 		 247 aa  225  5.0000000000000005e-58  Shewanella sp. MR-7  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008577  Shewana3_3343  lysine decarboxylase transcriptional regulator, CadC  48.59 
 
 		 247 aa  225  5.0000000000000005e-58  Shewanella sp. ANA-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008321  Shewmr4_0783  lysine decarboxylase transcriptional regulator, CadC  48.19 
 
 		 247 aa  224  1e-57  Shewanella sp. MR-4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009438  Sputcn32_0880  transcriptional regulator, CadC  47.39 
 
 		 247 aa  223  2e-57  Shewanella putrefaciens CN-32  Bacteria  normal  0.102623  n/a   
 
 
-
 
NC_009997  Sbal195_3653  transcriptional regulator, CadC  46.99 
 
 		 249 aa  221  9.999999999999999e-57  Shewanella baltica OS195  Bacteria  normal  0.409424  normal  1 
 
 
-
 
NC_009831  Ssed_0883  response regulator receiver protein  46.83 
 
 		 244 aa  220  1.9999999999999999e-56  Shewanella sediminis HAW-EB3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009665  Shew185_3534  transcriptional regulator, CadC  46.59 
 
 		 249 aa  220  1.9999999999999999e-56  Shewanella baltica OS185  Bacteria  normal  1  n/a   
 
 
-
 
NC_011663  Sbal223_3459  transcriptional regulator, CadC  46.18 
 
 		 249 aa  218  1e-55  Shewanella baltica OS223  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009052  Sbal_0833  transcriptional regulator, CadC  46.18 
 
 		 249 aa  218  1e-55  Shewanella baltica OS155  Bacteria  normal  1  n/a   
 
 
-
 
NC_009092  Shew_0760  response regulator receiver protein  43.22 
 
 		 273 aa  197  1.0000000000000001e-49  Shewanella loihica PV-4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010506  Swoo_0885  transcriptional regulator, CadC  43.2 
 
 		 246 aa  195  8.000000000000001e-49  Shewanella woodyi ATCC 51908  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010506  Swoo_0881  putative transcriptional regulator, CadC  29.3 
 
 		 246 aa  100  3e-20  Shewanella woodyi ATCC 51908  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009831  Ssed_0879  hypothetical protein  28.57 
 
 		 248 aa  94.4  2e-18  Shewanella sediminis HAW-EB3  Bacteria  hitchhiker  0.00268947  normal  1 
 
 
-
 
NC_008345  Sfri_0653  hypothetical protein  26.27 
 
 		 248 aa  72.4  0.000000000007  Shewanella frigidimarina NCIMB 400  Bacteria  hitchhiker  0.00719508  n/a   
 
 
-
 
NC_004347  SO_0936  transcriptional regulator  26.02 
 
 		 248 aa  68.9  0.00000000008  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009901  Spea_0793  putative transcriptional regulator, CadC  24.42 
 
 		 248 aa  64.3  0.000000002  Shewanella pealeana ATCC 700345  Bacteria  normal  0.790637  n/a   
 
 
-
 
NC_009092  Shew_0757  putative transcriptional regulator, CadC  37.89 
 
 		 151 aa  63.2  0.000000004  Shewanella loihica PV-4  Bacteria  normal  0.19634  normal  1 
 
 
-
 
NC_008321  Shewmr4_0779  response regulator receiver protein  24.8 
 
 		 249 aa  61.2  0.00000002  Shewanella sp. MR-4  Bacteria  normal  0.365042  normal  1 
 
 
-
 
NC_008577  Shewana3_3347  transcriptional regulator  22.44 
 
 		 249 aa  58.5  0.00000009  Shewanella sp. ANA-3  Bacteria  normal  0.730311  normal  1 
 
 
-
 
NC_008322  Shewmr7_3244  response regulator receiver protein  24.41 
 
 		 249 aa  57.8  0.0000002  Shewanella sp. MR-7  Bacteria  normal  1  normal  1 
 
 
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