30 homologs were found in PanDaTox collection
for query gene Sfri_1065 on replicon NC_008345
Organism: Shewanella frigidimarina NCIMB 400



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008345  Sfri_1065  sodium pump decarboxylases, gamma subunit  100 
 
 		 80 aa  157  5e-38  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
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NC_009831  Ssed_1320  sodium pump decarboxylase, gamma subunit  59.26 
 
 		 98 aa  86.7  9e-17  Shewanella sediminis HAW-EB3  Bacteria  normal  0.219843  hitchhiker  0.0088654 
 
 
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NC_010506  Swoo_3337  sodium pump decarboxylase, gamma subunit  51.25 
 
 		 81 aa  84  6e-16  Shewanella woodyi ATCC 51908  Bacteria  normal  1  hitchhiker  0.0000602904 
 
 
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NC_009901  Spea_1198  sodium pump decarboxylase, gamma subunit  50 
 
 		 81 aa  78.6  0.00000000000003  Shewanella pealeana ATCC 700345  Bacteria  normal  0.0495339  n/a   
 
 
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NC_008321  Shewmr4_2987  sodium pump decarboxylases, gamma subunit  46.25 
 
 		 95 aa  75.9  0.0000000000002  Shewanella sp. MR-4  Bacteria  normal  1  normal  0.809625 
 
 
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NC_008577  Shewana3_3166  sodium pump decarboxylases, gamma subunit  46.25 
 
 		 85 aa  75.5  0.0000000000002  Shewanella sp. ANA-3  Bacteria  normal  1  normal  1 
 
 
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NC_008322  Shewmr7_3069  sodium pump decarboxylases, gamma subunit  47.5 
 
 		 85 aa  75.1  0.0000000000003  Shewanella sp. MR-7  Bacteria  normal  1  normal  0.692299 
 
 
-
 
NC_009092  Shew_1219  sodium pump decarboxylases, gamma subunit  49.38 
 
 		 82 aa  73.2  0.000000000001  Shewanella loihica PV-4  Bacteria  hitchhiker  0.0000225864  normal  1 
 
 
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NC_009438  Sputcn32_1029  sodium pump decarboxylase, gamma subunit  44.19 
 
 		 88 aa  71.2  0.000000000004  Shewanella putrefaciens CN-32  Bacteria  normal  1  n/a   
 
 
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NC_009052  Sbal_1024  sodium pump decarboxylase, gamma subunit  40.23 
 
 		 100 aa  66.2  0.0000000001  Shewanella baltica OS155  Bacteria  normal  1  n/a   
 
 
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NC_011663  Sbal223_3267  sodium pump decarboxylase, gamma subunit  39.77 
 
 		 88 aa  65.5  0.0000000002  Shewanella baltica OS223  Bacteria  normal  1  normal  0.0150987 
 
 
-
 
NC_009997  Sbal195_1125  sodium pump decarboxylase, gamma subunit  38.37 
 
 		 88 aa  65.5  0.0000000002  Shewanella baltica OS195  Bacteria  normal  0.65585  normal  1 
 
 
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NC_009665  Shew185_1091  sodium pump decarboxylase, gamma subunit  39.77 
 
 		 88 aa  65.5  0.0000000003  Shewanella baltica OS185  Bacteria  normal  1  n/a   
 
 
-
 
NC_008700  Sama_1051  oxaloacetate decarboxylase, gamma subunit  48.81 
 
 		 85 aa  60.1  0.000000009  Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.000671999  normal  0.540867 
 
 
-
 
NC_008740  Maqu_0970  sodium pump decarboxylases, gamma subunit  37.5 
 
 		 83 aa  58.5  0.00000003  Marinobacter aquaeolei VT8  Bacteria  normal  0.134882  n/a   
 
 
-
 
NC_013456  VEA_002524  oxaloacetate decarboxylase gamma chain  40.74 
 
 		 85 aa  58.2  0.00000003  Vibrio sp. Ex25  Bacteria  normal  0.0628389  n/a   
 
 
-
 
NC_011312  VSAL_I0638  oxaloacetate decarboxylase subunit gamma  39.76 
 
 		 83 aa  57.8  0.00000004  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.471241  n/a   
 
 
-
 
NC_009783  VIBHAR_03492  oxaloacetate decarboxylase subunit gamma  39.51 
 
 		 92 aa  57.8  0.00000005  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009654  Mmwyl1_3624  sodium pump decarboxylase, gamma subunit  39.19 
 
 		 83 aa  57  0.00000008  Marinomonas sp. MWYL1  Bacteria  hitchhiker  0.0000194054  decreased coverage  0.0000000418029 
 
 
-
 
NC_008576  Mmc1_3195  sodium pump decarboxylases, gamma subunit  39.74 
 
 		 81 aa  52.8  0.000002  Magnetococcus sp. MC-1  Bacteria  normal  0.139992  normal  1 
 
 
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NC_011138  MADE_02842  putative oxaloacetate decarboxylase subunit gamma  38.1 
 
 		 68 aa  46.6  0.0001  Alteromonas macleodii 'Deep ecotype'  Bacteria  hitchhiker  0.00149059  n/a   
 
 
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NC_003910  CPS_1048  oxaloacetate decarboxylase, gamma subunit  35.63 
 
 		 92 aa  46.6  0.0001  Colwellia psychrerythraea 34H  Bacteria  normal  0.299241  n/a   
 
 
-
 
NC_011149  SeAg_B3544  oxaloacetate decarboxylase subunit gamma  36.14 
 
 		 80 aa  44.3  0.0005  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  1  n/a   
 
 
-
 
NC_007575  Suden_1260  pyruvate carboxylase/oxaloacetate decarboxylase gamma subunit  38.36 
 
 		 79 aa  43.1  0.001  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  0.406933  n/a   
 
 
-
 
NC_008709  Ping_3377  oxaloacetate decarboxylase subunit gamma  36.84 
 
 		 82 aa  43.5  0.001  Psychromonas ingrahamii 37  Bacteria  normal  0.0177539  normal  1 
 
 
-
 
NC_007963  Csal_0692  sodium pump decarboxylase, gamma subunit  35.62 
 
 		 80 aa  43.1  0.001  Chromohalobacter salexigens DSM 3043  Bacteria  normal  1  n/a   
 
 
-
 
NC_007912  Sde_1305  ribonuclease D  35.9 
 
 		 80 aa  43.5  0.001  Saccharophagus degradans 2-40  Bacteria  hitchhiker  0.00021107  normal  0.0271144 
 
 
-
 
NC_009439  Pmen_2894  sodium pump decarboxylase, gamma subunit  34.94 
 
 		 98 aa  42  0.003  Pseudomonas mendocina ymp  Bacteria  normal  0.11111  normal  0.988078 
 
 
-
 
NC_009457  VC0395_A0084  oxaloacetate decarboxylase subunit gamma  37.35 
 
 		 86 aa  41.6  0.004  Vibrio cholerae O395  Bacteria  hitchhiker  0.000518126  n/a   
 
 
-
 
NC_011205  SeD_A3713  oxaloacetate decarboxylase subunit gamma  33.73 
 
 		 80 aa  40.8  0.006  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  1  normal  1 
 
 
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