26 homologs were found in PanDaTox collection
for query gene Shew_1219 on replicon NC_009092
Organism: Shewanella loihica PV-4



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009092  Shew_1219  sodium pump decarboxylases, gamma subunit  100 
 
 		 82 aa  165  2e-40  Shewanella loihica PV-4  Bacteria  hitchhiker  0.0000225864  normal  1 
 
 
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NC_010506  Swoo_3337  sodium pump decarboxylase, gamma subunit  58.54 
 
 		 81 aa  94.7  4e-19  Shewanella woodyi ATCC 51908  Bacteria  normal  1  hitchhiker  0.0000602904 
 
 
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NC_009831  Ssed_1320  sodium pump decarboxylase, gamma subunit  59.76 
 
 		 98 aa  94  6e-19  Shewanella sediminis HAW-EB3  Bacteria  normal  0.219843  hitchhiker  0.0088654 
 
 
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NC_009901  Spea_1198  sodium pump decarboxylase, gamma subunit  50 
 
 		 81 aa  73.2  0.000000000001  Shewanella pealeana ATCC 700345  Bacteria  normal  0.0495339  n/a   
 
 
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NC_008321  Shewmr4_2987  sodium pump decarboxylases, gamma subunit  45.68 
 
 		 95 aa  70.1  0.000000000009  Shewanella sp. MR-4  Bacteria  normal  1  normal  0.809625 
 
 
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NC_008577  Shewana3_3166  sodium pump decarboxylases, gamma subunit  44.44 
 
 		 85 aa  68.2  0.00000000004  Shewanella sp. ANA-3  Bacteria  normal  1  normal  1 
 
 
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NC_008322  Shewmr7_3069  sodium pump decarboxylases, gamma subunit  46.25 
 
 		 85 aa  66.2  0.0000000001  Shewanella sp. MR-7  Bacteria  normal  1  normal  0.692299 
 
 
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NC_008345  Sfri_1065  sodium pump decarboxylases, gamma subunit  49.38 
 
 		 80 aa  63.9  0.0000000006  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
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NC_009438  Sputcn32_1029  sodium pump decarboxylase, gamma subunit  41.86 
 
 		 88 aa  59.7  0.00000001  Shewanella putrefaciens CN-32  Bacteria  normal  1  n/a   
 
 
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NC_009997  Sbal195_1125  sodium pump decarboxylase, gamma subunit  38.37 
 
 		 88 aa  58.5  0.00000003  Shewanella baltica OS195  Bacteria  normal  0.65585  normal  1 
 
 
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NC_009665  Shew185_1091  sodium pump decarboxylase, gamma subunit  40.23 
 
 		 88 aa  58.2  0.00000004  Shewanella baltica OS185  Bacteria  normal  1  n/a   
 
 
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NC_009052  Sbal_1024  sodium pump decarboxylase, gamma subunit  41.38 
 
 		 100 aa  58.2  0.00000004  Shewanella baltica OS155  Bacteria  normal  1  n/a   
 
 
-
 
NC_008228  Patl_3013  sodium pump decarboxylases, gamma subunit  46.38 
 
 		 109 aa  57  0.00000008  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.0628711  n/a   
 
 
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NC_011663  Sbal223_3267  sodium pump decarboxylase, gamma subunit  38.37 
 
 		 88 aa  57  0.00000009  Shewanella baltica OS223  Bacteria  normal  1  normal  0.0150987 
 
 
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NC_007963  Csal_0692  sodium pump decarboxylase, gamma subunit  39.74 
 
 		 80 aa  52.4  0.000002  Chromohalobacter salexigens DSM 3043  Bacteria  normal  1  n/a   
 
 
-
 
NC_009654  Mmwyl1_3624  sodium pump decarboxylase, gamma subunit  39.73 
 
 		 83 aa  51.2  0.000005  Marinomonas sp. MWYL1  Bacteria  hitchhiker  0.0000194054  decreased coverage  0.0000000418029 
 
 
-
 
NC_013456  VEA_002524  oxaloacetate decarboxylase gamma chain  35.71 
 
 		 85 aa  51.2  0.000005  Vibrio sp. Ex25  Bacteria  normal  0.0628389  n/a   
 
 
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NC_008700  Sama_1051  oxaloacetate decarboxylase, gamma subunit  45.68 
 
 		 85 aa  50.8  0.000007  Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.000671999  normal  0.540867 
 
 
-
 
NC_008576  Mmc1_3195  sodium pump decarboxylases, gamma subunit  37.65 
 
 		 81 aa  50.1  0.000009  Magnetococcus sp. MC-1  Bacteria  normal  0.139992  normal  1 
 
 
-
 
NC_009783  VIBHAR_03492  oxaloacetate decarboxylase subunit gamma  36.59 
 
 		 92 aa  50.1  0.00001  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_003910  CPS_1048  oxaloacetate decarboxylase, gamma subunit  36.36 
 
 		 92 aa  48.9  0.00002  Colwellia psychrerythraea 34H  Bacteria  normal  0.299241  n/a   
 
 
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NC_011312  VSAL_I0638  oxaloacetate decarboxylase subunit gamma  37.65 
 
 		 83 aa  45.8  0.0002  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.471241  n/a   
 
 
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NC_008740  Maqu_0970  sodium pump decarboxylases, gamma subunit  33.33 
 
 		 83 aa  43.9  0.0007  Marinobacter aquaeolei VT8  Bacteria  normal  0.134882  n/a   
 
 
-
 
NC_008709  Ping_3377  oxaloacetate decarboxylase subunit gamma  42.5 
 
 		 82 aa  42.7  0.002  Psychromonas ingrahamii 37  Bacteria  normal  0.0177539  normal  1 
 
 
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NC_014150  Bmur_0062  sodium pump decarboxylase, gamma subunit  39.51 
 
 		 82 aa  42  0.003  Brachyspira murdochii DSM 12563  Bacteria  decreased coverage  5.2649800000000005e-24  n/a   
 
 
-
 
NC_002977  MCA2481  oxaloacetate decarboxylase, gamma subunit  31.33 
 
 		 85 aa  41.6  0.004  Methylococcus capsulatus str. Bath  Bacteria  normal  1  n/a   
 
 
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