24 homologs were found in PanDaTox collection
for query gene Shew185_1091 on replicon NC_009665
Organism: Shewanella baltica OS185



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009665  Shew185_1091  sodium pump decarboxylase, gamma subunit  100 
 
 
88 aa  177  4e-44  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_3267  sodium pump decarboxylase, gamma subunit  97.73 
 
 
88 aa  174  5e-43  Shewanella baltica OS223  Bacteria  normal  normal  0.0150987 
 
 
-
 
NC_009997  Sbal195_1125  sodium pump decarboxylase, gamma subunit  95.45 
 
 
88 aa  171  1.9999999999999998e-42  Shewanella baltica OS195  Bacteria  normal  0.65585  normal 
 
 
-
 
NC_009052  Sbal_1024  sodium pump decarboxylase, gamma subunit  95.45 
 
 
100 aa  168  2e-41  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_1029  sodium pump decarboxylase, gamma subunit  63.04 
 
 
88 aa  110  4.0000000000000004e-24  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_3166  sodium pump decarboxylases, gamma subunit  60.47 
 
 
85 aa  100  5e-21  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_2987  sodium pump decarboxylases, gamma subunit  60.47 
 
 
95 aa  99  2e-20  Shewanella sp. MR-4  Bacteria  normal  normal  0.809625 
 
 
-
 
NC_008322  Shewmr7_3069  sodium pump decarboxylases, gamma subunit  57.61 
 
 
85 aa  97.4  6e-20  Shewanella sp. MR-7  Bacteria  normal  normal  0.692299 
 
 
-
 
NC_009831  Ssed_1320  sodium pump decarboxylase, gamma subunit  39.33 
 
 
98 aa  63.5  0.000000001  Shewanella sediminis HAW-EB3  Bacteria  normal  0.219843  hitchhiker  0.0088654 
 
 
-
 
NC_010506  Swoo_3337  sodium pump decarboxylase, gamma subunit  40.23 
 
 
81 aa  62.8  0.000000002  Shewanella woodyi ATCC 51908  Bacteria  normal  hitchhiker  0.0000602904 
 
 
-
 
NC_009092  Shew_1219  sodium pump decarboxylases, gamma subunit  40.23 
 
 
82 aa  58.2  0.00000004  Shewanella loihica PV-4  Bacteria  hitchhiker  0.0000225864  normal 
 
 
-
 
NC_009901  Spea_1198  sodium pump decarboxylase, gamma subunit  38.37 
 
 
81 aa  55.1  0.0000003  Shewanella pealeana ATCC 700345  Bacteria  normal  0.0495339  n/a   
 
 
-
 
NC_011312  VSAL_I0638  oxaloacetate decarboxylase subunit gamma  31.4 
 
 
83 aa  51.6  0.000003  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.471241  n/a   
 
 
-
 
NC_008345  Sfri_1065  sodium pump decarboxylases, gamma subunit  40.91 
 
 
80 aa  48.9  0.00002  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_1048  oxaloacetate decarboxylase, gamma subunit  36.78 
 
 
92 aa  48.1  0.00004  Colwellia psychrerythraea 34H  Bacteria  normal  0.299241  n/a   
 
 
-
 
NC_011138  MADE_02842  putative oxaloacetate decarboxylase subunit gamma  35.71 
 
 
68 aa  45.4  0.0002  Alteromonas macleodii 'Deep ecotype'  Bacteria  hitchhiker  0.00149059  n/a   
 
 
-
 
NC_010506  Swoo_1739  sodium pump decarboxylase gamma subunit  31.71 
 
 
83 aa  45.4  0.0002  Shewanella woodyi ATCC 51908  Bacteria  normal  normal  0.301356 
 
 
-
 
NC_013456  VEA_002524  oxaloacetate decarboxylase gamma chain  28.24 
 
 
85 aa  44.7  0.0005  Vibrio sp. Ex25  Bacteria  normal  0.0628389  n/a   
 
 
-
 
NC_009783  VIBHAR_03492  oxaloacetate decarboxylase subunit gamma  26.44 
 
 
92 aa  44.3  0.0006  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008740  Maqu_0970  sodium pump decarboxylases, gamma subunit  33.73 
 
 
83 aa  43.9  0.0008  Marinobacter aquaeolei VT8  Bacteria  normal  0.134882  n/a   
 
 
-
 
NC_009654  Mmwyl1_3624  sodium pump decarboxylase, gamma subunit  34.57 
 
 
83 aa  43.5  0.001  Marinomonas sp. MWYL1  Bacteria  hitchhiker  0.0000194054  decreased coverage  0.0000000418029 
 
 
-
 
NC_008228  Patl_3013  sodium pump decarboxylases, gamma subunit  37.14 
 
 
109 aa  41.2  0.005  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.0628711  n/a   
 
 
-
 
NC_007963  Csal_0692  sodium pump decarboxylase, gamma subunit  31.33 
 
 
80 aa  40.4  0.007  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_002977  MCA2481  oxaloacetate decarboxylase, gamma subunit  31.87 
 
 
85 aa  40  0.01  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>