| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1219 |
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| Symbol | |
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| ID | 4922705 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1417286 |
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| End bp | 1417534 |
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| Gene Length | 249 bp |
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| Protein Length | 82 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640162759 |
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| Product | sodium pump decarboxylases, gamma subunit |
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| Protein accession | YP_001093348 |
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| Protein GI | 127512151 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01195] sodium pump decarboxylases, gamma subunit |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000225864 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGATTCAA TGGCTCAACA GATAATGGAA GCACTGATGA TCATGGTGCT GGGTATGGGG
TTGGTGTTTA TCTTCCTAAC CATACTCATT GGGGTCGTTA ATCTGGTGGC CTGGAAATGT
GCGCCTAAAC CTAGTCTCGC ACCACTAGCC GAAGCGAGCG AAGCGCAAGT TTCACGCTTT
CCAGGCGTCG ACCCTAAGAT GGTCGCCGTG ATCACCGCCG CCGTCCATCA ATATCGCGCC
AAAGCATAA
|
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| Protein sequence | MDSMAQQIME ALMIMVLGMG LVFIFLTILI GVVNLVAWKC APKPSLAPLA EASEAQVSRF
PGVDPKMVAV ITAAVHQYRA KA
|
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| |