12 homologs were found in PanDaTox collection
for query gene Sbal_3185 on replicon NC_009052
Organism: Shewanella baltica OS155



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009052  Sbal_3185  hypothetical protein  100 
 
 
58 aa  108  2.0000000000000002e-23  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3328  transmembrane pair domain-containing protein  100 
 
 
144 aa  85.5  2e-16  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_1184  transmembrane pair domain protein  100 
 
 
144 aa  85.5  2e-16  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_3184  transmembrane pair domain-containing protein  100 
 
 
144 aa  85.1  3e-16  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_013456  VEA_003832  hypothetical protein  62.22 
 
 
152 aa  60.1  0.00000001  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_1343  transmembrane pair domain-containing protein  55.56 
 
 
136 aa  58.2  0.00000003  Shewanella woodyi ATCC 51908  Bacteria  hitchhiker  0.00249061  hitchhiker  0.0000928256 
 
 
-
 
NC_009831  Ssed_1243  hypothetical protein  54.35 
 
 
136 aa  57.4  0.00000006  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.548617 
 
 
-
 
NC_003910  CPS_0422  hypothetical protein  52.17 
 
 
142 aa  51.6  0.000004  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_1826  transmembrane pair domain-containing protein  50 
 
 
141 aa  50.8  0.000007  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.239684  n/a   
 
 
-
 
NC_009092  Shew_1150  transmembrane pair domain-containing protein  48.89 
 
 
140 aa  50.1  0.00001  Shewanella loihica PV-4  Bacteria  normal  0.177691  normal  0.0722868 
 
 
-
 
NC_009901  Spea_1137  transmembrane pair domain-containing protein  48.89 
 
 
137 aa  46.6  0.0001  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_01850  hypothetical protein  66.67 
 
 
140 aa  45.1  0.0003  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
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