| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1826 |
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| Symbol | |
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| ID | 4278094 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 2154308 |
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| End bp | 2154733 |
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| Gene Length | 426 bp |
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| Protein Length | 141 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 638134611 |
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| Product | transmembrane pair domain-containing protein |
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| Protein accession | YP_750514 |
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| Protein GI | 114563001 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4125] Predicted membrane protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.239684 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAAAGAA GAGAAAGAGT GTTCCACGCC GTGTCTTTTG AGGTAATAGC GTTGGCCTTT
ATTGTGCCAG TGAGTGCGAT GTTAGTGGAA AAAAACAGCA CAGACATGTT GATAGTGAGT
ATTTGTTTGT CATTGTTTGC TGTTTTTTGG AACTACGTTT ACAACATATT GTTTGATAAG
CTCAACGGTT CTGACAGAGT TGAGCGTAAA ATTGGCATTA GAGTCGTTCA TGCATTGGGT
TTTGAAGGCG GGATGTTATT TTTCACCATC CCATTAGTGT CATGGTATTT GTCATTAAGT
CTGATTGACA CCTTAATATT AGAAGCTGGG GTTTTAGGCT TTATTTTAGT GTATACCGCA
GTCTTTAATT GGCTTTACGA CGTGTATCAA CCGTACCAAA AATGGTTTGC TAATTTGGCA
CATTAA
|
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| Protein sequence | MQRRERVFHA VSFEVIALAF IVPVSAMLVE KNSTDMLIVS ICLSLFAVFW NYVYNILFDK
LNGSDRVERK IGIRVVHALG FEGGMLFFTI PLVSWYLSLS LIDTLILEAG VLGFILVYTA
VFNWLYDVYQ PYQKWFANLA H
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