Gene Swoo_1343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_1343 
Symbol 
ID6115583 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp1692967 
End bp1693377 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content41% 
IMG OID641632831 
Producttransmembrane pair domain-containing protein 
Protein accessionYP_001759730 
Protein GI170725704 
COG category[S] Function unknown 
COG ID[COG4125] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00249061 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000928256 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAAACTA AAGAGAGAGT ATTTCACGCA ATCATGTTTG AACTTTTGGC ATTAGCTATT 
GTTGTTCCTC TGGCTGCCAT GTTTAGTAGC AAAGGTGCGT CATCATTGAT GATAGTCGGT
GTTGGCCTCA GCTTATATGC TGTTATCTGG AACTATTTTT ACAATATCTG GTTCGATAGG
AAATTTGGTT GTGACCGCGC TTCGAGAACA GTGACAGTGC GAGTTGCTCA CACATTGGGC
TTTGAGGGCG GGATTATCTT TATAACTGTG CCAATTGTAG CCTGGTTTTT AAATATCAGT
TTAGGTGCCG CACTATTGAT GGAAGCTGGC TTTCTGATAT TTTTCTTTTT CTATGCTATC
GGATTTAACT GGTGTTATGA CAATATTCGC AGCAGGATGG TGGCAGCATA A
 
Protein sequence
MQTKERVFHA IMFELLALAI VVPLAAMFSS KGASSLMIVG VGLSLYAVIW NYFYNIWFDR 
KFGCDRASRT VTVRVAHTLG FEGGIIFITV PIVAWFLNIS LGAALLMEAG FLIFFFFYAI
GFNWCYDNIR SRMVAA