Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_1343 |
Symbol | |
ID | 6115583 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 1692967 |
End bp | 1693377 |
Gene Length | 411 bp |
Protein Length | 136 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 641632831 |
Product | transmembrane pair domain-containing protein |
Protein accession | YP_001759730 |
Protein GI | 170725704 |
COG category | [S] Function unknown |
COG ID | [COG4125] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00249061 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0000928256 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCAAACTA AAGAGAGAGT ATTTCACGCA ATCATGTTTG AACTTTTGGC ATTAGCTATT GTTGTTCCTC TGGCTGCCAT GTTTAGTAGC AAAGGTGCGT CATCATTGAT GATAGTCGGT GTTGGCCTCA GCTTATATGC TGTTATCTGG AACTATTTTT ACAATATCTG GTTCGATAGG AAATTTGGTT GTGACCGCGC TTCGAGAACA GTGACAGTGC GAGTTGCTCA CACATTGGGC TTTGAGGGCG GGATTATCTT TATAACTGTG CCAATTGTAG CCTGGTTTTT AAATATCAGT TTAGGTGCCG CACTATTGAT GGAAGCTGGC TTTCTGATAT TTTTCTTTTT CTATGCTATC GGATTTAACT GGTGTTATGA CAATATTCGC AGCAGGATGG TGGCAGCATA A
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Protein sequence | MQTKERVFHA IMFELLALAI VVPLAAMFSS KGASSLMIVG VGLSLYAVIW NYFYNIWFDR KFGCDRASRT VTVRVAHTLG FEGGIIFITV PIVAWFLNIS LGAALLMEAG FLIFFFFYAI GFNWCYDNIR SRMVAA
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