| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1243 |
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| Symbol | |
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| ID | 5611568 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1474923 |
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| End bp | 1475333 |
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| Gene Length | 411 bp |
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| Protein Length | 136 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640932096 |
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| Product | hypothetical protein |
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| Protein accession | YP_001472982 |
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| Protein GI | 157374382 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4125] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.548617 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAACCA AAGAGAGAGT ATTTCACGCA ATTTTATTTG AAATAATAGC GTTGGCTATC
GTGGTGCCTG CGGCCGCCAT GTTCAGTGAT AAAGACGCCT CTTCATTGAT CGTTGTGGGA
GTGGGTTTAA GTGTTTACGC CGTAGTTTGG AATTATTTTT ACAATATCTG GTTTGATAAG
CAATTTGGTG CAGAGCGTTC ATCACGTAGC TTGTTAATGA GGTTTGGACA TACACTTGGC
TTCGAAGGGG GAATCATTTT TGTCACTGTG CCTCTGGTTG CATGGTTTTT AGGGATAAGT
TTAACCGCTG CCTTGCTTCT TGAAGCGGCA TTCTTAATAT TTTTCTTTGT TTACGCGATT
GTGTTTAACT GGTGCTATGA CTATTTCAGA GCCCAGATGC AAATAGCATA A
|
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| Protein sequence | MKTKERVFHA ILFEIIALAI VVPAAAMFSD KDASSLIVVG VGLSVYAVVW NYFYNIWFDK
QFGAERSSRS LLMRFGHTLG FEGGIIFVTV PLVAWFLGIS LTAALLLEAA FLIFFFVYAI
VFNWCYDYFR AQMQIA
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