| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1150 |
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| Symbol | |
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| ID | 4921461 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1324509 |
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| End bp | 1324931 |
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| Gene Length | 423 bp |
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| Protein Length | 140 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640162685 |
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| Product | transmembrane pair domain-containing protein |
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| Protein accession | YP_001093280 |
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| Protein GI | 127512083 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4125] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.177691 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0722868 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTACTA CAGAGAGAAT CCTACATTCG GTGCTTTTTG AGATCTTTGC CCTGGCCTTA
GTAGTGCCCA TCGCCATCTG GTTCACCGGC CACGGTGTGG GTGAGATGGC CGCCGTCGGT
ATTGGTCTTA GCCTCTATAC TGTCACCTGG AACTACTTCT ACAACCTGGG GTTCGACAAC
TATTTCGGTG AAGATCGTAC CAAGCGCTCG CTTAAACTGC GGGTGGTGCA TGCCCTGGGC
TTCGAAGGTG GATTAGTCTT CGTGACTGTG CCTGTGGTGG CCTGGTTTCT GGGGATCACC
ATCTGGCAAT CTTTGATGCT GGAGGCGGTT TTCTTAGTGG TGTTTTTCTT CTATGCCATT
ATCTTTAACT GGCTTTTTGA CTGGGCAAGA TCTAAGTTTT ATGGGCAGCG TGCGAAGGCT
TAA
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| Protein sequence | MSTTERILHS VLFEIFALAL VVPIAIWFTG HGVGEMAAVG IGLSLYTVTW NYFYNLGFDN
YFGEDRTKRS LKLRVVHALG FEGGLVFVTV PVVAWFLGIT IWQSLMLEAV FLVVFFFYAI
IFNWLFDWAR SKFYGQRAKA
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