27 homologs were found in PanDaTox collection
for query gene SERP1330 on replicon NC_002976
Organism: Staphylococcus epidermidis RP62A



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_002976  SERP1330  N-acetylmuramoyl-L-alanine amidase  100 
 
 
283 aa  580  1e-164  Staphylococcus epidermidis RP62A  Bacteria  normal  0.0937897  n/a   
 
 
-
 
NC_009632  SaurJH1_1862  mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase  84.7 
 
 
284 aa  494  1e-139  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_1827  mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase  84.7 
 
 
284 aa  494  1e-139  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.397476  n/a   
 
 
-
 
NC_009632  SaurJH1_1135  N-acetylmuramoyl-L-alanine amidase  45.93 
 
 
1248 aa  184  1.0000000000000001e-45  Staphylococcus aureus subsp. aureus JH1  Bacteria  unclonable  0.00817868  n/a   
 
 
-
 
NC_009487  SaurJH9_1112  N-acetylmuramoyl-L-alanine amidase., mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase  45.93 
 
 
1248 aa  184  1.0000000000000001e-45  Staphylococcus aureus subsp. aureus JH9  Bacteria  unclonable  0.00229916  n/a   
 
 
-
 
NC_002976  SERP0636  bifunctional autolysin  43.54 
 
 
1335 aa  181  2e-44  Staphylococcus epidermidis RP62A  Bacteria  unclonable  0.0000166594  n/a   
 
 
-
 
NC_011898  Ccel_1562  Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase  41.7 
 
 
545 aa  177  1e-43  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_0363  mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase  36.6 
 
 
624 aa  165  5.9999999999999996e-40  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_009632  SaurJH1_0372  mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase  36.6 
 
 
624 aa  165  5.9999999999999996e-40  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_0909  mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase  37.33 
 
 
632 aa  161  9e-39  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_009632  SaurJH1_0927  mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase  37.33 
 
 
632 aa  161  9e-39  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_009632  SaurJH1_2373  mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase  34.24 
 
 
258 aa  158  1e-37  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.628854  n/a   
 
 
-
 
NC_009487  SaurJH9_2330  mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase  34.24 
 
 
258 aa  158  1e-37  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_002976  SERP1891  N-acetylmuramoyl-L-alanine amidase  36.36 
 
 
258 aa  154  2e-36  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_1245  mannosyl-glycoprotein endo-beta-N-acetylglucosamidase domain-containing protein  32.04 
 
 
969 aa  91.7  1e-17  Clostridium perfringens SM101  Bacteria  normal  0.0232944  n/a   
 
 
-
 
NC_008261  CPF_1439  mannosyl-glycoprotein endo-beta-N-acetylglucosamidase domain-containing protein  31.07 
 
 
1049 aa  90.5  2e-17  Clostridium perfringens ATCC 13124  Bacteria  unclonable  0.00896108  n/a   
 
 
-
 
NC_009674  Bcer98_3449  N-acetylmuramoyl-L-alanine amidase  34.51 
 
 
843 aa  61.2  0.00000002  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_1890  N-acetylmuramoyl-L-alanine amidase  30.28 
 
 
470 aa  60.1  0.00000004  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.00294488  n/a   
 
 
-
 
NC_011658  BCAH187_A1939  N-acetylmuramoyl-L-alanine amidase, family 4  29.15 
 
 
470 aa  58.9  0.0000001  Bacillus cereus AH187  Bacteria  hitchhiker  0.0000781755  n/a   
 
 
-
 
NC_006274  BCZK1629  S-layer protein  28.05 
 
 
470 aa  57  0.0000003  Bacillus cereus E33L  Bacteria  hitchhiker  0.00040233  n/a   
 
 
-
 
NC_009674  Bcer98_1431  S-layer domain-containing protein  28.16 
 
 
458 aa  55.1  0.000001  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS1683  N-acetylmuramoyl-L-alanine amidase  29.35 
 
 
459 aa  54.3  0.000002  Bacillus anthracis str. Sterne  Bacteria  hitchhiker  0.00306779  n/a   
 
 
-
 
NC_007530  GBAA_1818  N-acetylmuramoyl-L-alanine amidase  29.35 
 
 
459 aa  54.3  0.000002  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  hitchhiker  0.000000545238  n/a   
 
 
-
 
NC_011773  BCAH820_1863  N-acetylmuramoyl-L-alanine amidase, family 4  29.35 
 
 
459 aa  54.3  0.000002  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.27744e-53 
 
 
-
 
NC_011725  BCB4264_A2476  S-layer protein  30.06 
 
 
472 aa  53.9  0.000003  Bacillus cereus B4264  Bacteria  normal  0.612094  n/a   
 
 
-
 
NC_010001  Cphy_3466  SH3 type 3 domain-containing protein  25.52 
 
 
1281 aa  53.5  0.000004  Clostridium phytofermentans ISDg  Bacteria  normal  0.180669  n/a   
 
 
-
 
NC_011772  BCG9842_B2837  S-layer protein  33.09 
 
 
472 aa  52.8  0.000006  Bacillus cereus G9842  Bacteria  normal  0.0122747  hitchhiker  0.0000000116253 
 
 
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