Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP1891 |
Symbol | |
ID | 3241983 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | - |
Start bp | 1913337 |
End bp | 1914113 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 637168582 |
Product | N-acetylmuramoyl-L-alanine amidase |
Protein accession | YP_189452 |
Protein GI | 57867760 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG4193] Beta- N-acetylglucosaminidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAAAGA ATACTCGGCT TCGAATGACG ACATTGTTCA TAATTAGCAT ACTCGTCATT TTAGCAATAC TTTTTCTTAT ATTTGATACA AACCTTTTTA AAAATGATGT TAAACATACA TTTAAAGAAG CGGTGTCTCT TCAAACAAGT GAGGGAAATA TCCATACTAA AGAAGTTAAT GGTAAGTTTA TATATGCTTC CAAACAAGAT ATAGAGAAAG CTATGCAAAT AAAACATAGT GATAATGATT TGAAGTACAT GGATATATCA GAAAAAGTAC CTATGTCAGA GAAGGAAGTT AACCATATCT TAAAAGGAAA AGGTATTTTA GAAAATAAGG GATCAACGTT TATTAAAGCC CAAGATAAAT ATGAAGTGAA TATCCTATAT CTCATCAGTC ATGCACTAGT TGAGACAGGA AATGGTCAAT CAGATTTATC AAAAGGAATT AAAGAAGGTA ACCATCACTA TTATAACTTT TTTGGTATTG GTGCTTTTGA TGAAGATGCT GTAAAGACTG GTAAGAGTTT TGCTAAACAG AAGAAGTGGA CCACTCCTGA AAAAGCGATA ATGGGTGGCG CGTGGTTTGT GAGATACCAT TACTTTAAAA ATAATCAATT GAGCTTATAT CAAATGCGGT GGAACCCACA AAATCCAGGC CAACATCAAT ATGCTAGTGA TATTCAGTGG GCCAATAATA TAGCTGATTT AATGGAGAAA TACTATGATA AATATGGAAT AAAAAAAGAT CATATAAGAA AAAAATATTA CAAATAA
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Protein sequence | MLKNTRLRMT TLFIISILVI LAILFLIFDT NLFKNDVKHT FKEAVSLQTS EGNIHTKEVN GKFIYASKQD IEKAMQIKHS DNDLKYMDIS EKVPMSEKEV NHILKGKGIL ENKGSTFIKA QDKYEVNILY LISHALVETG NGQSDLSKGI KEGNHHYYNF FGIGAFDEDA VKTGKSFAKQ KKWTTPEKAI MGGAWFVRYH YFKNNQLSLY QMRWNPQNPG QHQYASDIQW ANNIADLMEK YYDKYGIKKD HIRKKYYK
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