Gene SERP1891 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP1891 
Symbol 
ID3241983 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand
Start bp1913337 
End bp1914113 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content31% 
IMG OID637168582 
ProductN-acetylmuramoyl-L-alanine amidase 
Protein accessionYP_189452 
Protein GI57867760 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG4193] Beta- N-acetylglucosaminidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAAAGA ATACTCGGCT TCGAATGACG ACATTGTTCA TAATTAGCAT ACTCGTCATT 
TTAGCAATAC TTTTTCTTAT ATTTGATACA AACCTTTTTA AAAATGATGT TAAACATACA
TTTAAAGAAG CGGTGTCTCT TCAAACAAGT GAGGGAAATA TCCATACTAA AGAAGTTAAT
GGTAAGTTTA TATATGCTTC CAAACAAGAT ATAGAGAAAG CTATGCAAAT AAAACATAGT
GATAATGATT TGAAGTACAT GGATATATCA GAAAAAGTAC CTATGTCAGA GAAGGAAGTT
AACCATATCT TAAAAGGAAA AGGTATTTTA GAAAATAAGG GATCAACGTT TATTAAAGCC
CAAGATAAAT ATGAAGTGAA TATCCTATAT CTCATCAGTC ATGCACTAGT TGAGACAGGA
AATGGTCAAT CAGATTTATC AAAAGGAATT AAAGAAGGTA ACCATCACTA TTATAACTTT
TTTGGTATTG GTGCTTTTGA TGAAGATGCT GTAAAGACTG GTAAGAGTTT TGCTAAACAG
AAGAAGTGGA CCACTCCTGA AAAAGCGATA ATGGGTGGCG CGTGGTTTGT GAGATACCAT
TACTTTAAAA ATAATCAATT GAGCTTATAT CAAATGCGGT GGAACCCACA AAATCCAGGC
CAACATCAAT ATGCTAGTGA TATTCAGTGG GCCAATAATA TAGCTGATTT AATGGAGAAA
TACTATGATA AATATGGAAT AAAAAAAGAT CATATAAGAA AAAAATATTA CAAATAA
 
Protein sequence
MLKNTRLRMT TLFIISILVI LAILFLIFDT NLFKNDVKHT FKEAVSLQTS EGNIHTKEVN 
GKFIYASKQD IEKAMQIKHS DNDLKYMDIS EKVPMSEKEV NHILKGKGIL ENKGSTFIKA
QDKYEVNILY LISHALVETG NGQSDLSKGI KEGNHHYYNF FGIGAFDEDA VKTGKSFAKQ
KKWTTPEKAI MGGAWFVRYH YFKNNQLSLY QMRWNPQNPG QHQYASDIQW ANNIADLMEK
YYDKYGIKKD HIRKKYYK