| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_3466 |
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| Symbol | |
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| ID | 5743578 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | - |
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| Start bp | 4265471 |
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| End bp | 4269316 |
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| Gene Length | 3846 bp |
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| Protein Length | 1281 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 641294578 |
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| Product | SH3 type 3 domain-containing protein |
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| Protein accession | YP_001560556 |
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| Protein GI | 160881588 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4193] Beta- N-acetylglucosaminidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.180669 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTAAAA AAGGGCGCCA TAGCGCCAGA ATTGAGGTTA ATATGAGACT AGAAATGAAA
CACAAACGCT TAATTATATG GATATTATGC ATCAGCATGT TGATTCCAAA TATACTTTGG
CAAACTCCAA ATGCAGCTTA TGCAGCAACA AAAGGGATTT GTACAGCATC AACGCTCTAT
GTTAGAAAAG GGCCGCAAAC TTCGTATGAT AAGGTAACCT CAGGTGGCGC AGATGTATAT
CTCGTAAAGG ATCAAGAGGT AACAATTTTA TCAGAAAAAG ACGGATGGTA TGAGATTGAA
GCTACATTTG GTGGGAAAAA GATCAAAGGC TATTCTCTGG GAACCTACAT AAAGAAAGTG
GATGGTACTG CAAGTAAACC AACTCCAACT CCTACACCAT CAAGCGGTTC TTCAGCAACA
TATAAATTAA GTCAACCAGC AACAGTGAAC GCATCCCAAT TAAATATTAG AAAAGATAAC
AATACTACAA GTACTGTCTT AGGAACCTTA GTAAGTGGTG ACTCCGTTAC TGTAATAGGG
ACTAAGTGGA ATGGTGTGGA TTGTTGGTAT CAAATTCAGA CAAAAGTAGG CGGCAAAACG
GTAACTGGAT ATGTTCTGGC TATTTATGTC GAGATGAATT ATAAAAGCGG AATTTATGGC
AAGATTCGTA CCAATAATAC AGCAATGCAA CTTGATGCAG GAGAAGGAAA TAAAACGATA
TCGACTGCAG ATGGAACAAA GCTTACTTTA AATAAGAATC GTGCAATATT TATAACCGGA
GAAAAACGCG TAGGAAACGA TAAATGGTTT TATGTCTATA TTACGTACGG TGGGGCAAAA
TATTATGGTT ATGTTCCAGC GAGCCTTGTA GAGTTAGATG GAACCAAGGT AACAACCGGA
GGTAATGAGA CAATCGGAGA CGAGGATACT GATGATAGTC AGGATAATTC AGATAATTCA
AATTCCGGTG GTAGCAGCGA AGGAGAGAAT CAAACAGAAA CTCCAAACAC TTCAACAACA
CCAGCAAGCC ATAAGATAAA TCTAGGTGGT AAGGTAAATG CTGAGGGAGT CAATGTAAGA
AAAGATGCAA CAACAGGCAG TACTAAGGTA ACCTCTTTAA ATAAAAACAC CAGTGTGACT
ATAGTAAAAG AGAAGTACGA CGGTAATGAT AAGTGGTATC AGATATCCTT TGTACAGGAT
AAAAAAACAG TAACTGGTTA TATGCTTAGT AAATATGTTA CTGCGACAGT GGGAAGTGGA
TTTTATGCAA AACCTACAAA CGAAATCACT TACAAAAAGG TAGCTTCTCT TACAGCAGAG
GATTTATATA CCGACGATGG AGAGTTGATT ACAGCAACGC AAGGTTCCTA TGTATGGGTG
TCTGAGGAGA AAACAGTTGC TGGTACAAAG TGGTTCCGTA TTAGCTATAA AGAGCCTACT
GTTACTTATT TTGGATATGT AACGGAGAAT GATCTAGAGT TAATTGGTAA GTCAAAAGAT
ACTGCAGTGG ATGAGACTCC AACCAGTACG CCAAAACCTA CCGAAGCGGT AAAACCAACA
GCAACTCCAA CTCCAACACA GAAACCAATC GATAAAAATG AAGCTTTTCA AATACCTGGT
GTAATAACTG CATCAACAGT AAATCTTAGA CAGGATGCAA CGACAAGTAG CAAGGTACTA
GGAACGCTCG CGAAAAATAC AAAACTAACC GTACTCAATC AGGTTAAGGT TGGAAGTGAT
ATTTGGTACC GAGTAGCTGT TACTGTAAAC AAGAAACAAA CGATTGGACA TGTTCTTAGT
AATTATGTGA AATTAACATT AACAGATAAG GCGACTGCTT CTATCTTAGC AAATGGCACT
AAAATAAGCT CTTCAGCGAA ATCTACAGCT GGCTACGTGA AATATAAGAA TGGAACGCTA
GTAAGTCTTG CTAAAAATAC AAAAGTAACC GTAATCTCAG AAGAAACTTC TGACGATAAA
TGGTTTAAGG TTTCCTATAC AAAATCAGGA GAGACAGTAA CAGGTTATCT GAAAGCAAAC
TCAGTTACAC TAGTTGCTAA CGGACCAGTA CCTACTGCGA CTCCGAAACC AACAGCAACA
CCAAAGCCGA CTGTAGCACC AACGACGAAG CCAACTGTGG CACCGTCGAC GACGCCAAAA
CCAACGGCAA CGCCAAAACC AACAGTAACT CCTAGTGCAA AACCAAAGCC TACGGCTACA
CCAACTCCAG CAGTAAAACT CTTCACGGCG GATGGTATGA TAATCAACGC AACTGCTTTA
GTTGTAAAAC AAGCGCCAGG TTATAGTAGT TCATTTGTTA AAAATAGTGC AGGATATGCT
GTAACACTTT ATAATAATGA TAAAGTAAAG GTAAATGGAA AGTATTACGA GGATAAAATC
TATTGGTATA ATATAAAATT CACTCAAAGT GGTGTTGAAT ATTCGGGCTA TGTAAACGAT
AATTATGTTA AAATTGATGA ATCAACGATA GTTGATGGTG ATTCTTCATC AAGTGTTGAA
ACTCCAACGC CAACAGCACC TGTAGTAAGT CAAGATTTTG AACAACTGTT AACAATACAG
GGCTTTCCAG ATAGCTATAA GCCATATTTA CGTGCACTGC ACGAAGCCAA TCCAGACTGG
ACATTTGAGG CATATCACAC AGGACTTGAT TGGAATTCAG TAATCGATAA TCAAAGTATT
CCTGGAAAGA ATTTGCTATC AAATGCAAAA GGAATCGAGT GGAAATCACT AGAGGATAAG
GCATACAACT GGAAGACGGA TAGTTTCATT GTATATGATG GTTCTACTTG GGTAACAGCT
TCAAGAGATG CTATCATGTA CTATATGGAT CCAAGAAACT TCCTAGATGA TAAGTCAATC
TACCAGTTTG AGGTGCTTAC TTATAAAACA TCCTATCAAA ATCTAAGCGG TGTTGAGAGT
ATTCTAAAGT CTACGGCTAT GTATAATTCA AGTTATACTT ATACCGATGA ATATGGGACG
ACGCAAAGTA TCACCTATGG TGAGACCTTT ATAAAAGCAG CAGAGTATTC TGGTGTAAGT
CCTTATCACC TAGCTTCTCG TGTAAAGCAG GAAGTAGTGA CTGGTACCTC TACCTTAAGT
AATAGTGTAT CTGGTACTGT AAGCGGATGG GAAGGTTTAT ATAACTTCTA TAATATTGGT
GCTTATAACT CCACGGCAGA AGGTGGTGCA ATTGCAAATG GTTTAAAGTA TGCAAAGAGT
GGTAGCACGA ATGCAACTTT AAATGTGAAG TCCTTAATTC CTTGGAACAA TCGTTACCGT
TCCATCGTAG GGGGAGCATT TATTATTGGT GACTCCTATA TCAACCGAGG ACAGGATACC
ATATACCTTC AAAAGTTTAA TGTAACACCT ACTTCAACAC ATTCCCATCA GTATATGTCG
AATGTAGAAG CACCATTTTC TGAAGGAAAG AAGGTTGGCG CAGCTTATGC TCAGATTGGA
AATCTCCCAT TGGTATTTTC CATTCCTGTT TACTTAAATA TGCCAAAGAT TCCATGTGCC
GCACCAACAA CAAAGTATAA TCCGAATAAT TATCTAAAGA CATTAAGCGT AAAAGATTTC
AATGGAAATG AATTGACATT AACACCAACA TTTGACATAC TAAATACAAA AGAATTCTTC
TTAGTTGTAC CTAACAGCTG TGAAGGAATT AATATATCTG CTGCGACAGT AAGTAATAAG
GCAGTTCTTA GTGGAACCGG TGTTGTGCAA TTAAATCCAG GTCTTAACGA AATTACAATT
ATGGTAATTG CTCAAAATGG AGATTTACGT GACTATAAGA TTTCAGTTGC TCGAGAATTA
CAGTAA
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| Protein sequence | MVKKGRHSAR IEVNMRLEMK HKRLIIWILC ISMLIPNILW QTPNAAYAAT KGICTASTLY
VRKGPQTSYD KVTSGGADVY LVKDQEVTIL SEKDGWYEIE ATFGGKKIKG YSLGTYIKKV
DGTASKPTPT PTPSSGSSAT YKLSQPATVN ASQLNIRKDN NTTSTVLGTL VSGDSVTVIG
TKWNGVDCWY QIQTKVGGKT VTGYVLAIYV EMNYKSGIYG KIRTNNTAMQ LDAGEGNKTI
STADGTKLTL NKNRAIFITG EKRVGNDKWF YVYITYGGAK YYGYVPASLV ELDGTKVTTG
GNETIGDEDT DDSQDNSDNS NSGGSSEGEN QTETPNTSTT PASHKINLGG KVNAEGVNVR
KDATTGSTKV TSLNKNTSVT IVKEKYDGND KWYQISFVQD KKTVTGYMLS KYVTATVGSG
FYAKPTNEIT YKKVASLTAE DLYTDDGELI TATQGSYVWV SEEKTVAGTK WFRISYKEPT
VTYFGYVTEN DLELIGKSKD TAVDETPTST PKPTEAVKPT ATPTPTQKPI DKNEAFQIPG
VITASTVNLR QDATTSSKVL GTLAKNTKLT VLNQVKVGSD IWYRVAVTVN KKQTIGHVLS
NYVKLTLTDK ATASILANGT KISSSAKSTA GYVKYKNGTL VSLAKNTKVT VISEETSDDK
WFKVSYTKSG ETVTGYLKAN SVTLVANGPV PTATPKPTAT PKPTVAPTTK PTVAPSTTPK
PTATPKPTVT PSAKPKPTAT PTPAVKLFTA DGMIINATAL VVKQAPGYSS SFVKNSAGYA
VTLYNNDKVK VNGKYYEDKI YWYNIKFTQS GVEYSGYVND NYVKIDESTI VDGDSSSSVE
TPTPTAPVVS QDFEQLLTIQ GFPDSYKPYL RALHEANPDW TFEAYHTGLD WNSVIDNQSI
PGKNLLSNAK GIEWKSLEDK AYNWKTDSFI VYDGSTWVTA SRDAIMYYMD PRNFLDDKSI
YQFEVLTYKT SYQNLSGVES ILKSTAMYNS SYTYTDEYGT TQSITYGETF IKAAEYSGVS
PYHLASRVKQ EVVTGTSTLS NSVSGTVSGW EGLYNFYNIG AYNSTAEGGA IANGLKYAKS
GSTNATLNVK SLIPWNNRYR SIVGGAFIIG DSYINRGQDT IYLQKFNVTP TSTHSHQYMS
NVEAPFSEGK KVGAAYAQIG NLPLVFSIPV YLNMPKIPCA APTTKYNPNN YLKTLSVKDF
NGNELTLTPT FDILNTKEFF LVVPNSCEGI NISAATVSNK AVLSGTGVVQ LNPGLNEITI
MVIAQNGDLR DYKISVAREL Q
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